Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2716 ATGGATTCGGAGACATCGGGTTCCGGCAGGGACTGGTTCTTCCCGTCGCCATCGTTCTTGCGGTCCTCTTCTTCTTCGCAGTATGGCCATCGATTCTATTCAAACTCAAAGCCTTACACTCCTCCTACCCTCACTCGCATCCGTCATCGCCGTAGAGTTAAATTCCCCCGGACTCACACTCTCACTAACGACAAACCTCAGCTTTCCGACACTCAAAACAACGTTAACTCATCTCCCAACAATAACCTTATATTCCCTTCGCAATCTCGTTTCCAGTTTGCTCTCCTGACGTTGACTATTGTTTTCTTTTTGCTGCTGCTTCTGCTTCTCCTCCGTAATGCGCATCTAGAAAGTCAACTCACTAAGTTGCAGGGTGATATTCTCGGCCTTAATATCATATTACACGCCTGCCACCAATTGGACACCTTCAACGTGACAAGTTCTTCATCTCAAGACGCTAATTCTGGGTTAAGCGAAAATTTCAAAAGAAATCTAGCCCTTTTTTTCTCCTTCATACTTCTTTTTATCCCTCTCATCATTTTCAAGTACATAGACTATGTGTCGAAATCAATATTTTCTGACAATTTATCCGAAAGAGTTTCTCTAAACAAGCAACTAGCATATCGGGTTGATGTCTTTTTATCGGTTTACCCGTATGCTAAACCCCTCGTGTTGTTAGTGGCAACGGTGTTGCTAATTTTACTTGGAGGATTGGCCCTTTTTGGGGTAACTACCGAGGATTTAGCACATTGCCTCTGGTTATCTTGGACCTACGTTGCTGATTCTGGCAATCATGCCAGCTCTCAAGGTATTGGTCCTAGGTTAGTTGCGATTTCCATTAGCTTTGGTGGGATGCTTATATTTGCAATGATGCTTGGACTTGTGTCCGACGCAATATCTGAGAAATTTGACTCGCTGAGGAAGGGAAAAAGCGAGGTGGTTGAGCAAAATCATACTTTAATTCTTGGTTGGAGTGATAAATTGGGTTCATTACTAAATCAGCTTGCCATAGCCAATGAGAGTCTGGGTGGAGGAACTGTTGCAGTGATGGCTGAGCGAGACAAGGAAGAAATGGAGCTTGATATTGCAAAAATGGAGTTCGATTTCAAGGGAACATCTGTCATATGCAGAAGTGGCAGCCCTCTGATTGTGGCTGATCTGAAAAAGGTTTCTGTTTCAAAAGCACGTGCTATAATAGTCCTTGCTGAAGATGGGAATGCTGATCAGAGTGATGCCCGAGCATTGAGAACAGTCTTAAGTCTGACTGGAGTAAAAGAAGGATTACGAGGGCACATAGTGGTTGAATTGAGTGATCTAGACAATGAAGTCCTTGTTAAACTTGTGGGTGGTGATCTTGTTGAAACTGTTGTAGCTCATGATGTCATTGGTCGCTTGATGATTCAGTGTGCTAGGCAGCCTGGACTTGCACAGATTTGGGAAGACATACTAGGATTTGAAAATTGTGAATTCTACATCAAAAGATGGCCACAGTTGGAAGGCATGCAATTTGAGGATGTATTAATCAGCTTTCCTGCTGCAATTCCTTGTGGAATCAAAGTTGCATCGTACGATGAGGATGATGATACATATGCCCCAGCATCCTTGCCTACGGTTTGGAGGGGAAGCTTGCCCAAGGACTTTGTTTATCCAAAATCTCCTGAGAGAATCCTTTTTTGTGGTTGGAGGCGTGATATGGAGGATATGATCATGGTTTTGGATGCATCTTTAGCACATGGATCAGAACTCTGGATGTTCAATGATGTTCCAGAAAAAGAAAGAGAAAAGAAGCTAACTGATGGTGGCCTTGACATAAATCGATTAGAAAACATATCTCTGGTTAATCGTGATGGGAATGCTGTTATACGCCGCCACTTGGAAAGCCTTCCTCTGGAATCATTTGATTCAATATTGATTTTGGCTGATGAATCAGTAGAGGATTCAGCAATTCAAGCTGACTCTAGATCTCTTGCCACTCTACTTTTAATTCGTGACATACAAGCTAGGCGTCTTCCTTATGTAGCTATGGCCAGTCAAACTCATGGAGGAAGCTTCTCTAAAGGCTCATGGATTGGGGAAATGAAGCAGGCTTCTGATAAAACTGTTATAATTAGTGAAATTTTGGACCCTAGGACAAAAAATCTTCTCTCTATGTCAAGGATCAGTGATTATGTTTTATCAAATGAACTTGTGAGCATGGCTTTGGCCATGGTTGCAGAAGATCGGCAGATAAATGATGTATTGGAGGAGCTCTTTGCGGAGGAGGGAAATGAGATGCATATAAGGCCTGCAGATCTATACCTTTGTGAAGGTGAAGAATTGAGTTTCTATGAAATAATGTTACGAGCTAGGCAGAGAAGAGAGATTGTGATTGGGTACCGTTTAGATAATGCAGAGAGGGCAGTGATTAACCCCCCAGCCAAAACTGACAGAAGGAAGTGGTCATTGAAGGATGTTTTTGTGGTGATTACTGAAAAGGAATGA 2481 0.4264 MDSETSGSGRDWFFPSPSFLRSSSSSQYGHRFYSNSKPYTPPTLTRIRHRRRVKFPRTHTLTNDKPQLSDTQNNVNSSPNNNLIFPSQSRFQFALLTLTIVFFLLLLLLLLRNAHLESQLTKLQGDILGLNIILHACHQLDTFNVTSSSSQDANSGLSENFKRNLALFFSFILLFIPLIIFKYIDYVSKSIFSDNLSERVSLNKQLAYRVDVFLSVYPYAKPLVLLVATVLLILLGGLALFGVTTEDLAHCLWLSWTYVADSGNHASSQGIGPRLVAISISFGGMLIFAMMLGLVSDAISEKFDSLRKGKSEVVEQNHTLILGWSDKLGSLLNQLAIANESLGGGTVAVMAERDKEEMELDIAKMEFDFKGTSVICRSGSPLIVADLKKVSVSKARAIIVLAEDGNADQSDARALRTVLSLTGVKEGLRGHIVVELSDLDNEVLVKLVGGDLVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFENCEFYIKRWPQLEGMQFEDVLISFPAAIPCGIKVASYDEDDDTYAPASLPTVWRGSLPKDFVYPKSPERILFCGWRRDMEDMIMVLDASLAHGSELWMFNDVPEKEREKKLTDGGLDINRLENISLVNRDGNAVIRRHLESLPLESFDSILILADESVEDSAIQADSRSLATLLLIRDIQARRLPYVAMASQTHGGSFSKGSWIGEMKQASDKTVIISEILDPRTKNLLSMSRISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNEMHIRPADLYLCEGEELSFYEIMLRARQRREIVIGYRLDNAERAVINPPAKTDRRKWSLKDVFVVITEKE* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2716 826 PANTHER ION CHANNEL CASTOR-RELATED 2 826 - -
Pvu9g2716 826 Pfam Castor and Pollux, part of voltage-gated ion channel 459 522 IPR010420 -
Pvu9g2716 826 Gene3D - 308 453 - -
Pvu9g2716 826 PANTHER ION CHANNEL POLLUX-RELATED 2 826 IPR044849 GO:0006811
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2716 Pvu-Chr9 37431329 37443611 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2716 K21866 - gmx:732613 1385.16