Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2714 ATGCCCATGGCTCTTGCAAACCAGCTCACGGGTTTGACCTCGTTTGCTTCTTCCAATTTGCTTCTTCACAGTAATCCTATGTTGCTTCCTTTCCAGAACACAAGAAGGGGTACGAGGTTCAGAAAAACAGCAAGGTTTCCTGTGGCAGCTATCAGTCAGAATTTTATGAAGACCACCCTTAGAGTGCATGCAGAGAAGGCAGTGCAATTCAAGGTCAGAGCTGTGGTAACAGTGAGGAACAAGATCAGAGAGGATTTCAGAGAAACCATGCTGAAGCATTTGGACGCCATCAGTGATAGAATAGGAACAAGAAATGTTGTTCTGGAGCTTATCAGCAACGACATTGATCCAAAAACGAAATCGCCAAAGAAGAGCAACAAAGCAGCCCTAAAGGACTGGTCCAAGAAATCCAGTGTGAAAGCAGAGAGAGTTAATTATACAACCGAATTCATTGTGGACTCGAATTTTGGAGTCCCTGGAGCTATTGCTGTGACAAACAAACACCAAAGAGAGTTCTTCTTGGAAAGTATAGTGATCGAAGGGTTTGTGAGTGGAGCAGTTCATTTTCCCTGCAACTCATGGGTACAAGGAGAGAGAATATTCTTTTCTAACAAGGCATATTTACCTTGTGACACACCTGGTGGGCTTAGAGTATTGAGGGAGAAGGAGTTGATAAGTCTTAGAGGTGATGGGAAAGGAGTTAGAAAATTGTCTGATAGAATATATGATTTCGACACATACAACGATTTGGGTAATCCAGATGCAGGAATTGAGCTTACCAGACCCATTCTTGGTGGAACCCAAAACCATCCATACCCAAGACGCTGTCGTACTGGTCGCGCCCCCACTGATACAGATATGCATGCAGAGAGTCGTGTGGAGTTGCCACAGCCTATGTACGTACCAAGAGACGAGCAATTCGACGAGTCTAAACTGAACACATTCGTAATCAAGAGGCTCAAGGCAGTGCTGCATAACTTGATCCCTGGCCTTAAGGCTAGTCTTTCTGCTAATAACCATGACTTCAACAGATTTTCAGACTTTGACGACCTTTACAATGATGGCCAGTCCTTGCAAGATGACATTATAAAGAAAATCCCATTCTCACAAGTGGTCACAAAGATACAGCAATGCACCCAGGGACTTCTCAAGTATGACACTCCCAAAATTATTTCCAAGGACAAGTTTGCCTGGCTTCGAGATGACGAATTCGCCAGGCAAGCAATAGCAGGAGTCAACCCTATTAACATTGAGCGGCTTCAAGTTTTCCCACCTGTCAGCAAACTTGACCCGGAAATTTATGGCCACCAAGAGTCTGCACTGAAAGAAGAGCATATTTTGGGACAACTTAATGGCGTGACCGTGCAAGAGGCAATAGAGGCAAATAAGCTGTTTATGATAGATTATCACGATGTCTATGTTCCATTTGTTGACGGGATCAATGCCCTTGAAGGTAGAAAATCCTATGCTACCCGCACCATATTTTTCTTGACACCGCTTGGCACTCTGAAACCAATTGCTATAGAACTTAGCCTCGGACCAAGTTCGGGATCGAAACGCATAGTTACCCCTCCTGTGGATGCAACTACATATTGGAAGTGGCAGCTTGCCAAAGCTCATGTTTGTGCCAATGATGCTGGTGTGCACCAACTTGTTAACCATTGGTTACGCACACATGCCTGCACGGAACCATTTATACTGTCTGCTCATAGACAATTAAGTGCAATGCATCCTGTTTTTAAGCTGTTGGATCCACACATGAGGTACACACTGGATATCAATGCTTTAGCTCGCCAGAAACTGATCAATGCTGATGGAATCATCGAGTCTAGTTTTACACCTGGGCGCTACTGCGCGGAGATCAGTTCTGCTGCATACAAGAACTTGTGGCGCTTTGACATGGAGGGCCTTCCCGCAGATCTCATACGCAGGGGAATGGCGGTACCTGACGCAACACAACCAAATGGTGTAAAGCTGGTAATAGAAGACTACCCGTACGCTGCGGATGGGCTTATGGTGTGGTCTGCAATTGAGAACTGGGTTGGCGCCTATGTGAAGCACTACTACGGCCATCCAAGCCAGATTTGCAACGACAGGGAGCTACAAGCATGGTACTCTGAGGCAATCAATGTGGGGCATGCTGATCTAAGGCATCAAAGGTGGTGGCCGACCTTGAATAGCAGTGAGGATCTTGTGTCTATACTTACCACCTTGATTTGGACGGTGTCCGCACAGCATGCAGCTATTAATTTTGGGCAGTACCCTTACGGAGGTTATGTGCCGAATCGTCCTCCGCTGATGAGAAGATTAATCCCAGAAGACGAAGAGGAAAAAAAGAGTGAAAAAAAAGCGAATTTCATGGCAGATCCAGAAAAGTATTTCCTAAATGCCCTGCCCAGCTTGTTACAAGCTACAAAGTATATGGCCATAGTTGACACACTCTCTACACACTCACCTGACGAGGAGTATTTGGGGGAGCGGCATCAGTCATCGATATGGTCAGGTGATGCAGAGATGATCGAGGCATTCTACAGATTCTCGGGAGAAATGAGAGGGATAGAAAAGGAGATTGAGCGAAGGAACTCTGATCCAACACTCAGAAACCGGTGTGGCCCAGGGGTTTTACCTTACGAGTTACTTGCACCTACTTCTCCACCCGGCGTTACATGCAGAGGGATTCCTAATAGTGTCTCCACCTAA 2700 0.4585 MPMALANQLTGLTSFASSNLLLHSNPMLLPFQNTRRGTRFRKTARFPVAAISQNFMKTTLRVHAEKAVQFKVRAVVTVRNKIREDFRETMLKHLDAISDRIGTRNVVLELISNDIDPKTKSPKKSNKAALKDWSKKSSVKAERVNYTTEFIVDSNFGVPGAIAVTNKHQREFFLESIVIEGFVSGAVHFPCNSWVQGERIFFSNKAYLPCDTPGGLRVLREKELISLRGDGKGVRKLSDRIYDFDTYNDLGNPDAGIELTRPILGGTQNHPYPRRCRTGRAPTDTDMHAESRVELPQPMYVPRDEQFDESKLNTFVIKRLKAVLHNLIPGLKASLSANNHDFNRFSDFDDLYNDGQSLQDDIIKKIPFSQVVTKIQQCTQGLLKYDTPKIISKDKFAWLRDDEFARQAIAGVNPINIERLQVFPPVSKLDPEIYGHQESALKEEHILGQLNGVTVQEAIEANKLFMIDYHDVYVPFVDGINALEGRKSYATRTIFFLTPLGTLKPIAIELSLGPSSGSKRIVTPPVDATTYWKWQLAKAHVCANDAGVHQLVNHWLRTHACTEPFILSAHRQLSAMHPVFKLLDPHMRYTLDINALARQKLINADGIIESSFTPGRYCAEISSAAYKNLWRFDMEGLPADLIRRGMAVPDATQPNGVKLVIEDYPYAADGLMVWSAIENWVGAYVKHYYGHPSQICNDRELQAWYSEAINVGHADLRHQRWWPTLNSSEDLVSILTTLIWTVSAQHAAINFGQYPYGGYVPNRPPLMRRLIPEDEEEKKSEKKANFMADPEKYFLNALPSLLQATKYMAIVDTLSTHSPDEEYLGERHQSSIWSGDAEMIEAFYRFSGEMRGIEKEIERRNSDPTLRNRCGPGVLPYELLAPTSPPGVTCRGIPNSVST* 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2714 899 Pfam Lipoxygenase 215 882 IPR013819 GO:0016702|GO:0046872
Pvu9g2714 899 Gene3D - 396 526 - -
Pvu9g2714 899 CDD PLAT_LH2 70 204 IPR042057 -
Pvu9g2714 899 PANTHER LIPOXYGENASE 30 898 IPR000907 GO:0016702|GO:0046872
Pvu9g2714 899 ProSitePatterns Lipoxygenases iron-binding region signature 1. 549 563 IPR020833 GO:0016702|GO:0046872
Pvu9g2714 899 Gene3D PLAT/LH2 domain 52 207 - -
Pvu9g2714 899 Pfam PLAT/LH2 domain 123 199 IPR001024 GO:0005515
Pvu9g2714 899 SUPERFAMILY Lipoxigenase 209 898 IPR036226 -
Pvu9g2714 899 PRINTS Lipoxygenase signature 531 548 IPR013819 GO:0016702|GO:0046872
Pvu9g2714 899 PRINTS Lipoxygenase signature 549 566 IPR013819 GO:0016702|GO:0046872
Pvu9g2714 899 PRINTS Lipoxygenase signature 569 589 IPR013819 GO:0016702|GO:0046872
Pvu9g2714 899 Gene3D - 311 395 IPR027433 -
Pvu9g2714 899 Gene3D - 528 898 - -
Pvu9g2714 899 MobiDBLite consensus disorder prediction 259 287 - -
Pvu9g2714 899 ProSiteProfiles PLAT domain profile. 86 209 IPR001024 GO:0005515
Pvu9g2714 899 PRINTS Plant lipoxygenase signature 179 197 IPR001246 GO:0016491
Pvu9g2714 899 PRINTS Plant lipoxygenase signature 238 254 IPR001246 GO:0016491
Pvu9g2714 899 PRINTS Plant lipoxygenase signature 271 290 IPR001246 GO:0016491
Pvu9g2714 899 PRINTS Plant lipoxygenase signature 339 360 IPR001246 GO:0016491
Pvu9g2714 899 PRINTS Plant lipoxygenase signature 383 399 IPR001246 GO:0016491
Pvu9g2714 899 PRINTS Plant lipoxygenase signature 422 441 IPR001246 GO:0016491
Pvu9g2714 899 PRINTS Plant lipoxygenase signature 489 513 IPR001246 GO:0016491
Pvu9g2714 899 PRINTS Plant lipoxygenase signature 811 825 IPR001246 GO:0016491
Pvu9g2714 899 ProSitePatterns Lipoxygenases iron-binding region signature 2. 576 586 IPR020834 GO:0016702|GO:0046872
Pvu9g2714 899 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 70 207 IPR036392 GO:0005515
Pvu9g2714 899 PANTHER LIPOXYGENASE 3, CHLOROPLASTIC 30 898 - -
Pvu9g2714 899 SMART LH2_4 70 204 IPR001024 GO:0005515
Pvu9g2714 899 Gene3D - 208 310 - -
Pvu9g2714 899 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 206 899 IPR013819 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2714 Pvu-Chr9 37415673 37419830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2714 3 898 Acyl Lipid Metabolism Gene Families AT1G17420 66.559 0.0 1260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2714 K00454 - gmx:100811820 1555.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2714 9 37415673 37419830 Pvu10g1340 10 39859076 39864979 PCT