Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2701 ATGGTCTCTATTGGTTCAAAAGCATTGGTCTCAAGAAGCTCAATGGGGGACCACGATTCTGAATCCCCCAAGCAAGCCAAAAGTAAGAGGAGAAAGCATAAGAAAGGAGGAGCCGCTCATGAATTCGATTCCAATCCCAAACACACAAACTCAAACTCAAACTCCAACTCCAACACCTTCACTTCCCCTCCTCAACTCTCCCGTGTTAGGAAACAGCTTGACCCTGAAACAACCCAATACTTCTCAGAAATTGCTAATCTTTTTGAAACTGAGGGGGTGGAATTGGAGGAACGATCACTTATATGTGCTAATGCTCTCCAAGAAACTAAGGGGAAAGAATTCGAAATAGCGTCGGATTATATTGTTAGCCACACTTTGGAGACCATTCTCCAGGGTTGTGATGTAGACCACCTTTGTGATTTCCTTCACTCTTCTGCTAACGACTTCCCCTATATTGCAATGGATAGATCTGGTTCTCATGTCGCTGAGACCGCCATCAAGTCTCTAGCCGTTCATCTCCAACATGATGAGGCTCGCCCTCTGGTTGAGGAGGCTTTAACCGTCATATGCAAGGTGATTGCAGCAAATTCTGTTGATGTAATGTGTAACTGCTATGGTTCTCATGTGCTTCGGACTCTTCTCTGCCTTTGTAGAGGAGTACCATTAGACAAGTCTGCATACTATTTATCAAAATCGACTACCCTGTTAGCAGAGCGGTTGAATTCAAAGGAGTTTTCAAAGAAAGATGATGAAACAAATTTTGAGCCCGGATTTCCAAATTTACTTAAAGTACTTGTGTCTGATATGTTAAAGCATGCTAAAAAACGTATCAAGACACTACAAGTTGACCAATTCAGTAGTTTGGTTTTTCAGACAGTGCTGAGGGTCTTGGCAGGTGATGATGAAGAGTTGCTACATGTGATTCCTTTCCTTCTTGGCTGCAAGGATAAGTATAATGCAGAGGAAAGTTTTATAAACACGAAAGTAGTAGCAGATCTCAAGAATTTGTTAAAAGAATCTAAATTTAGCCATCTAATGGAGGTCATTTTGGAAGTGTCCCCTGAGGCGTTGTTCAATGAATTATTCACTAAAGTATTCAGGAGTTCCTTGTTTGAGTTATCATCTCATCAACATGGGAACTTTGTTGTCCAAGCATTAATTTCTTATTCAAGCAATCAAGATCTGATGGAGTTGATATGGGAAGAACTTGGGCCAAATTTGGAGGATCTTTTCAAAATGGGAAGGTCAGGGGTTATTGCTTCACTTGTTGCTGCCAGTGAAAGGCTTCATGTTAATGAACGCAAGTGCTGTCAAGTCCTTGCTGATGCAGTATGTCCACCAGATGATTCTCCGAAAGGGATTGTTCCACGACTCATGTTTCTTGACAGCTGTTTCTCATACGAAGACAAGTCCAACTGGAGCTGGCAAAGTGGTGCTAGAATGAATGTCATGGGTTCTCTGATCTTACAGACAGTATTCCGGTTTAGAAGTGAATATATACAACCTTATATCACAAGTATAACTTCCATGGAGGCAACTCATGTACTTGAAGCAGTGGGAGATTCAAGAGGATCACATGTTATTGAGGCTTTTCTTTGTTCAGGAGCTTCTGGGAAACAGAAGCGCAGATTGGTTATCAAACTGAAAGGGCATTTTGGGGAGGTCGCACTCAACTCATCTGGTGCTTTTACCATTGATAAGTGCTTCACTGCCAGTAATCTGTCACTAAGAGAGGCTATAGTGTCTGAGGTGTTGGCTGTGCGAAGTGATCTTTCCAAGACAAAGCAGGGCTCTTACCTAATAAGGAAACTAGATATTGACGGATTTGCTGCGAATCCTGATCATTGGAGGTCAAAACAAGTATCCAAAGAATCTACTTATAATGATTTTTACACTATGTTTGGTTCCAATGATACAAAGTTGACGAAAAATGATTCCTTTCTGAGTGACACCTTGAATAATAAATCTAATCCAAAAGCTGTAAAGGAAATGAGGAAAGAAATTGACCAATCTCTAGGTTCTGGTGCATCTTTCTTGAGCTTCCAAAAGAACCCAAAAAAAGAAAAGCACAAAAGTAAGAAAAATGCTTATATTAGTGGAGACGATGATGAGTCGTCTAATAGGAAGAAGAGGTCTAAAAAGGAAAAGGTTGAAAGTGGGTTTGATACTGCTGCTACTGCAGCAACCGGGAAGACATTGAAGAAACGACGAAGAGATGACCTTTCCGAGGCTTCCCAGAAGAAAGTGAAGGCATAG 2256 0.4118 MVSIGSKALVSRSSMGDHDSESPKQAKSKRRKHKKGGAAHEFDSNPKHTNSNSNSNSNTFTSPPQLSRVRKQLDPETTQYFSEIANLFETEGVELEERSLICANALQETKGKEFEIASDYIVSHTLETILQGCDVDHLCDFLHSSANDFPYIAMDRSGSHVAETAIKSLAVHLQHDEARPLVEEALTVICKVIAANSVDVMCNCYGSHVLRTLLCLCRGVPLDKSAYYLSKSTTLLAERLNSKEFSKKDDETNFEPGFPNLLKVLVSDMLKHAKKRIKTLQVDQFSSLVFQTVLRVLAGDDEELLHVIPFLLGCKDKYNAEESFINTKVVADLKNLLKESKFSHLMEVILEVSPEALFNELFTKVFRSSLFELSSHQHGNFVVQALISYSSNQDLMELIWEELGPNLEDLFKMGRSGVIASLVAASERLHVNERKCCQVLADAVCPPDDSPKGIVPRLMFLDSCFSYEDKSNWSWQSGARMNVMGSLILQTVFRFRSEYIQPYITSITSMEATHVLEAVGDSRGSHVIEAFLCSGASGKQKRRLVIKLKGHFGEVALNSSGAFTIDKCFTASNLSLREAIVSEVLAVRSDLSKTKQGSYLIRKLDIDGFAANPDHWRSKQVSKESTYNDFYTMFGSNDTKLTKNDSFLSDTLNNKSNPKAVKEMRKEIDQSLGSGASFLSFQKNPKKEKHKSKKNAYISGDDDESSNRKKRSKKEKVESGFDTAATAATGKTLKKRRRDDLSEASQKKVKA* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2701 751 MobiDBLite consensus disorder prediction 677 751 - -
Pvu9g2701 751 PANTHER NUCLEOLAR PROTEIN 9 21 704 IPR040000 GO:0003723
Pvu9g2701 751 MobiDBLite consensus disorder prediction 1 16 - -
Pvu9g2701 751 Gene3D - 66 418 IPR011989 -
Pvu9g2701 751 MobiDBLite consensus disorder prediction 732 751 - -
Pvu9g2701 751 SUPERFAMILY ARM repeat 93 605 IPR016024 -
Pvu9g2701 751 SMART pum_5 272 306 IPR001313 GO:0003723
Pvu9g2701 751 SMART pum_5 108 143 IPR001313 GO:0003723
Pvu9g2701 751 SMART pum_5 365 400 IPR001313 GO:0003723
Pvu9g2701 751 SMART pum_5 547 582 IPR001313 GO:0003723
Pvu9g2701 751 SMART pum_5 192 229 IPR001313 GO:0003723
Pvu9g2701 751 SMART pum_5 144 179 IPR001313 GO:0003723
Pvu9g2701 751 Pfam Pumilio-family RNA binding repeat 371 399 IPR001313 GO:0003723
Pvu9g2701 751 MobiDBLite consensus disorder prediction 44 66 - -
Pvu9g2701 751 ProSiteProfiles Pumilio RNA-binding repeat profile. 364 401 IPR001313 GO:0003723
Pvu9g2701 751 Gene3D - 480 655 IPR011989 -
Pvu9g2701 751 MobiDBLite consensus disorder prediction 1 66 - -
Pvu9g2701 751 MobiDBLite consensus disorder prediction 694 720 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2701 K14790 - gmx:100797960 1209.9