Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2697 ATGGGAGCTCAGAGAGTGCGTGCAATTCAGGGAAAGGAAAAGTGCATTTCCTCTCCTTTTGTGGGAGGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGGAGCAGCTTTGTAAGAGATTCAGGACATAGAGGGGGAGGTCATAAGCGTCTATACCGTCAAATTGATTTTCGGCAGAATGAAAAAAACATATATAGTAGAATCGTAACCATAGAATATGACCCTAATCGAAATGCATCCATTTGTCTCATACACTATGGGGATGGTGAAAAAAAAATATATTTTACACCC 288 0.4097 MGAQRVRAIQGKEKCISSPFVGGGRGRGRGRRRSSFVRDSGHRGGGHKRLYRQIDFRQNEKNIYSRIVTIEYDPNRNASICLIHYGDGEKKIYFTP 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2697 96 PANTHER 50S RIBOSOMAL PROTEIN L2, CHLOROPLASTIC 21 93 - -
Pvu9g2697 96 SMART Ribosomal_L2_2 30 94 IPR002171 GO:0003735|GO:0005840|GO:0006412
Pvu9g2697 96 MobiDBLite consensus disorder prediction 33 47 - -
Pvu9g2697 96 MobiDBLite consensus disorder prediction 18 47 - -
Pvu9g2697 96 PANTHER RIBOSOMAL PROTEIN L2 21 93 IPR002171 GO:0003735|GO:0005840|GO:0006412
Pvu9g2697 96 Pfam Ribosomal Proteins L2, RNA binding domain 30 91 IPR022666 GO:0003735|GO:0005840|GO:0006412
Pvu9g2697 96 Gene3D - 4 96 IPR012340 -
Pvu9g2697 96 SUPERFAMILY Nucleic acid-binding proteins 35 93 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2697 Pvu-Chr9 37330444 37331112 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2697 K02886 - pvu:PHAVU_009G261200g 179.489