Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2666 AACAGTGGGAACACCCCTTTCGGATCACCAACACGAGTTCAGAAGCTGATAGCTTCCCAATCAGACCCTCTTCTGGCCAAAGAAATCTTCGATGTGGCCTCTCGCCAACCTAACTTCCGCCACACTTACTCGACCTATCTCATTCTCATCCTCAAGTTGGGTCGCTCCAAAAACTTCTCTTTCATCGACCATCTCCTCCGCTGCCTCAGATCCGATTCTCAACCCATCACTCCCACCCTCTTCACTTACTTGATCAGAGTCTACGCAGAAGCCGATTTGCCGGAAAAAGCCCTCAAAACCTTCTACAACATTCTCCACTTCGATTGCAAGCCTTTGCCCAAACACCTTAACCGCATTCTTGAGCTCCTCGTTTCCCACCGCAATTACATTCGCCCCGCCTTCCTTCTCTTCAAGGATGCTCACAGGTATGGGGTGGAACCCAACACCAAGTCCTACAACATTCTCATGCGCGCGTTCTGTCTCAATGGGGACATTAGCATTGCCTACTCACTGTTCAACAAAATGTTCAAACGAGATGTTGTGCCGGATATAGAGTCTTACCGGATTTTGATGCAGGCCTTGTGTCGGAAGAGTCAGGTGAATGGTGCTGTTGATCTGTTGGAGGATATGCTCAACAAAGGGTTTGTTCCGGATTCTTTGACTTACACCACTTTATTGAACAGTTTGTGTAGGAAGAAGAAGCTCAGGGAGGCTTACAAGCTTCTCTGTAGGATGAAGGTCAAAGGGTGCAATCCTGATATTGTTCATTATAATACTGTTATATTGGGGTTCTGTAGAGAGGGGCGTGCTCACGATGCCTGCAAGGTTATTGCGGACATGCGGGCCAATGGGTGCTTGCCTAATCTGGTGTCCTATCGTACTTTGGCGAGGGGCTTGTGTGACATGGGAATGCTTGATGAGGCTCGCAAGTATGTCGAGGAGATGCTGTGCAAAGGTTTTTCTCCTCATTTTGCTGTTGTTCACGCCTTGGTGAAGGGGTTTTGTAATGTTGGTAGGGCTGAGGATGCCTGTGGAGTTCTTACTATGTCTCTTGAACATGGGGAAGCTCCTCATGTGGATACTTGGATGGTCTTAATGCCTGTAATATGTGAAGTTGATGATGGTGGGAAAATCAGTGGTGCTTTGGAGGAAGTTCTTAAGATTGAAATAAAAGGGCATACTAGAATTGTGGATGCTGGCATTGGTTTGGAGAACTACTTGATTAAGAAGATACGAGCCAACTCCAGAGTATTCTAA 1257 0.4702 NSGNTPFGSPTRVQKLIASQSDPLLAKEIFDVASRQPNFRHTYSTYLILILKLGRSKNFSFIDHLLRCLRSDSQPITPTLFTYLIRVYAEADLPEKALKTFYNILHFDCKPLPKHLNRILELLVSHRNYIRPAFLLFKDAHRYGVEPNTKSYNILMRAFCLNGDISIAYSLFNKMFKRDVVPDIESYRILMQALCRKSQVNGAVDLLEDMLNKGFVPDSLTYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVILGFCREGRAHDACKVIADMRANGCLPNLVSYRTLARGLCDMGMLDEARKYVEEMLCKGFSPHFAVVHALVKGFCNVGRAEDACGVLTMSLEHGEAPHVDTWMVLMPVICEVDDGGKISGALEEVLKIEIKGHTRIVDAGIGLENYLIKKIRANSRVF* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2666 418 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 218 252 IPR002885 -
Pvu9g2666 418 PANTHER OS09G0532800 PROTEIN 4 410 - -
Pvu9g2666 418 Pfam PPR repeat 213 246 IPR002885 -
Pvu9g2666 418 SUPERFAMILY TPR-like 75 358 IPR011990 GO:0005515
Pvu9g2666 418 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 183 217 IPR002885 -
Pvu9g2666 418 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED 4 410 - -
Pvu9g2666 418 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 253 287 IPR002885 -
Pvu9g2666 418 Gene3D Tetratricopeptide repeat domain 246 400 IPR011990 GO:0005515
Pvu9g2666 418 TIGRFAM PPR: pentatricopeptide repeat domain 151 184 IPR002885 -
Pvu9g2666 418 TIGRFAM PPR: pentatricopeptide repeat domain 186 219 IPR002885 -
Pvu9g2666 418 TIGRFAM PPR: pentatricopeptide repeat domain 256 288 IPR002885 -
Pvu9g2666 418 TIGRFAM PPR: pentatricopeptide repeat domain 221 254 IPR002885 -
Pvu9g2666 418 TIGRFAM PPR: pentatricopeptide repeat domain 290 322 IPR002885 -
Pvu9g2666 418 Pfam PPR repeat family 252 301 IPR002885 -
Pvu9g2666 418 Pfam PPR repeat family 147 196 IPR002885 -
Pvu9g2666 418 Gene3D Tetratricopeptide repeat domain 11 111 IPR011990 GO:0005515
Pvu9g2666 418 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 288 322 IPR002885 -
Pvu9g2666 418 Pfam PPR repeat 81 104 IPR002885 -
Pvu9g2666 418 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 148 182 IPR002885 -
Pvu9g2666 418 Gene3D Tetratricopeptide repeat domain 112 245 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2666 Pvu-Chr9 37062760 37064016 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2666 78 391 Glycosyltransferase AT1G05670 29.618 4.35e-40 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2666 K20291 - gmx:100778820 768.844