Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2655 ATGGGTGGCGACACCATAGACATGGACAAGGAGAGATTGACGGCGGAGATGAACTTCAAGGACTCCTCTTCCGCCGTCATCAGAATCCGCCGCCGTCTACCCGATTTTCTTCAGTCGGTGAAGATAAAGTACGTGAAGCTGGGACTGGGATACGGTTACTCATGCAATGCAGCCAGCATTGTGATGCTGGCCATCACCCTTTCTCTCAGCTTCTCCCTCACCGGTCTCAAACTCTCCAAACTCTGCTCGCACCAGCTCGACGCCGAGACCGTGGCGGCGGCTTTCGCGGCAATCCTTTCCCTCGCCGCTCTCTTCCGGTGGAAGCGCTCCGGCGCGGTGTATCTGGTGGACTTCGCGTGCTACAAGCCGGAGAAGGAGCGGAAAATCTCGGTGGAGTCGTTCCTGAAGATGACCGAAGAGAGCGGGGGTTTCGAGGAAGAGTCTCTTCAGTTTCAGAGGAAGATTTCGACGAGAGCGGGTTTGGGCGACGAGACTTACCTACCCAGGGGAATCACTTCCCGGCCGCCGAATCTCTGCATGAGCGAGGCGCGGTTGGAGGCAGAGGAGGTGATGTTCGGGGCGTTGGACGCGCTTTTCGCGAAAACGGGCGTTGAGCCGAAGGACATTGACATTCTGGTGGTGAATTGTAGTTTGTTCAACCCTACCCCTTCTCTCTCCGCCATGATTGTGAACCACTACAAGCTCAGGAGCAACATCAAGAGCTACAACCTCGGCGGCATGGGATGCAGTGCGGGGCTCATTTCCGTTGACCTCGCCAAGGACCTTCTCAAAGCCAACCCCAACTCCTACGCGCTGGTTCTCAGCACCGAGAACATAACCCTCAATTGGTACTTCGGCAACGACCGCTCCATGCTCCTCTGTAACTGCATTTTCCGAATGGGCGGCGCCGCCGTCCTCCTCTCTAACAAGCCTTCCGATCGGTCCCGATCGAAGTACCAGCTGCTCCACACCGTCCGAACGCACAAGGGTGCCGACGACAAGAACTACAACTGCGTCTATCAGAAAGAGGACGATACCGGAAAAATAGGGGTGTGTTTGGCGAGGGAGTTAATGGCTGTGGCAGGGGATGCTCTGAAGACAAACATAACAACCTTGGGGCCGATGGTTCTGCCATACTCGGAGCAGTTGATGTTTTTCCTGTCGCTGGTTCGGAGGAAGGTGCTGAAGATGTCGGGGGTGAAGCCGTACATTCCGGACTTCAAGCTGGCGTTCGAGCACTTCTGCATCCACGCCGGTGGAAGAGCGGTGTTGGACGAGTTGCAGAAGAATCTGCAGCTGAGCGAGTGGCACATGGAGCCATCCAGAATGACGCTCCACCGCTTCGGCAACACCTCGAGCAGCTCCCTCTGGTACGAGCTTGCGTACACGGAGGCGAAGGGTCGGGTCGCGAAGGGGGACCGGGTCTGGCAGATCGCATTCGGGTCGGGTTTCAAGTGCAACAGCGCCGTGTGGAAGGCCGTGCGGGACATCCCGGAGTTAACTGAATGGCGTGGCAACCCCTGGGACGATTCCATCCACAACTATCCCCTTCATCTTAATCTTCCCACCACTTCTTAA 1578 0.5678 MGGDTIDMDKERLTAEMNFKDSSSAVIRIRRRLPDFLQSVKIKYVKLGLGYGYSCNAASIVMLAITLSLSFSLTGLKLSKLCSHQLDAETVAAAFAAILSLAALFRWKRSGAVYLVDFACYKPEKERKISVESFLKMTEESGGFEEESLQFQRKISTRAGLGDETYLPRGITSRPPNLCMSEARLEAEEVMFGALDALFAKTGVEPKDIDILVVNCSLFNPTPSLSAMIVNHYKLRSNIKSYNLGGMGCSAGLISVDLAKDLLKANPNSYALVLSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKPSDRSRSKYQLLHTVRTHKGADDKNYNCVYQKEDDTGKIGVCLARELMAVAGDALKTNITTLGPMVLPYSEQLMFFLSLVRRKVLKMSGVKPYIPDFKLAFEHFCIHAGGRAVLDELQKNLQLSEWHMEPSRMTLHRFGNTSSSSLWYELAYTEAKGRVAKGDRVWQIAFGSGFKCNSAVWKAVRDIPELTEWRGNPWDDSIHNYPLHLNLPTTS* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2655 525 CDD CHS_like 98 491 - -
Pvu9g2655 525 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 412 492 IPR013747 -
Pvu9g2655 525 SUPERFAMILY Thiolase-like 104 316 IPR016039 GO:0016746
Pvu9g2655 525 SUPERFAMILY Thiolase-like 298 494 IPR016039 GO:0016746
Pvu9g2655 525 Pfam FAE1/Type III polyketide synthase-like protein 108 394 IPR013601 GO:0006633|GO:0016020|GO:0016747
Pvu9g2655 525 PANTHER 3-KETOACYL-COA SYNTHASE 8 519 IPR012392 GO:0006633|GO:0016020|GO:0016747
Pvu9g2655 525 PIRSF Very_long_ch_3-ktacl-CoA_syn 35 525 IPR012392 GO:0006633|GO:0016020|GO:0016747
Pvu9g2655 525 Gene3D - 112 494 IPR016039 GO:0016746
Pvu9g2655 525 PANTHER 3-KETOACYL-COA SYNTHASE 1 8 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2655 Pvu-Chr9 36999072 37000933 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2655 4 519 Acyl Lipid Metabolism Gene Families AT1G01120 72.053 0.0 777
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2655 K15397 - gmx:100790385 948.347