Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2649 ATGAGACTCTTTGATCCTAATCAAGATGCTCTAGACGCCCTTGCAAATTCAGCCATTGAGCTCATTCTCGGGGTCCCAAACGTGGACCTTGAAGGTCTTGCTACAAGCTCTGACACTGCCATTCAATGGGTGCAAACCAACGTGTTGAACCACTGGCCCAGTGTCAAAATCAAGTACGTGGCAGTTGGCAACGAAGTGAATCCCGTTGAAGCGTCTTCTCAGTTTGCCCCACATGTTCTACCTGCAATCCAAAACATATACCAAGCTATTAGGGCTCAAGGCCTTCAGGATCAAATTAAGGTCACAACAGCCATTGATTTGAGCCTCTTAGGAAAGTCTTACCCCCCATCACAAGGCTCTTTCAGAGATGATGTGAGGTCATACATAGACCCTATTTTAGGGTACTTGGTGTATGCAAATGCACCTTTACTAGCCAATGTGTACCCTTATTTTAGTTACTCTGATAACCCTACAGACATATCACTTCCCTATGCTCTTTTCACCTCCCCAAACGTTGTTGTGTCGGATGGTGAATACGGATACCAGAATCTGTTTGATGCTATGTTGGATTCGTTGCATGCTGCAGTTGATGCCACTGGAATTGGTGATGTGGAGGTTGTTGTGTCCGAGAGTGGATGGCCATCGGATGGAGGAGAGTTTGCTGCTACTTTTGACAATGCAAACACCTACTTAGATAACTTGATTCGTCGTGCTGAAACAGGTAGCCCTAGAAGGCCTTCAAAACCCACAGAGATCTATGTGTTTGCTATGTTCGATGAGAATCAGAAGAGTCCTGAGAGAGAGAAACATTTTGGGCTCTTCTCTCCTGACAAACAAAAGAAGTATTCATTTGGATTCAGTGGATGA 867 0.4498 MRLFDPNQDALDALANSAIELILGVPNVDLEGLATSSDTAIQWVQTNVLNHWPSVKIKYVAVGNEVNPVEASSQFAPHVLPAIQNIYQAIRAQGLQDQIKVTTAIDLSLLGKSYPPSQGSFRDDVRSYIDPILGYLVYANAPLLANVYPYFSYSDNPTDISLPYALFTSPNVVVSDGEYGYQNLFDAMLDSLHAAVDATGIGDVEVVVSESGWPSDGGEFAATFDNANTYLDNLIRRAETGSPRRPSKPTEIYVFAMFDENQKSPEREKHFGLFSPDKQKKYSFGFSG* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2649 288 SUPERFAMILY (Trans)glycosidases 1 284 IPR017853 -
Pvu9g2649 288 Gene3D Glycosidases 1 287 - -
Pvu9g2649 288 ProSitePatterns Glycosyl hydrolases family 17 signature. 204 217 IPR000490 GO:0004553|GO:0005975
Pvu9g2649 288 Pfam Glycosyl hydrolases family 17 1 285 IPR000490 GO:0004553|GO:0005975
Pvu9g2649 288 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 1 285 IPR044965 GO:0004553|GO:0005975
Pvu9g2649 288 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE B 1 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2649 Pvu-Chr9 36951700 36952566 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2649 1 287 Glycoside Hydrolase AT4G16260 59.516 2.36e-120 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2649 - - pvu:PHAVU_009G256500g 580.867