Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2648 ATGGCTTCTCAGTTCCCCAGAAACCAGAGGTTCTCATTTGCTGCTTTCCTTCTTCTTTTTCAACTATTCACAGTAAACCTTATCACAACAGCAGATGCTCAAATCGGGGTGTGTTATGGCATGATGGGCAACAATCTCCCATCAGCCAATGAAGTTATAAACCTTTACAGATCAAACAACATAAGAAGAATGAGACTTTACGATCCCAATCAAGCAGCTCTGCAAGCACTCAGAAACTCAGGCATTGAACTCATTCTTGGAGTGCCAAACTCTGATCTTCAGGGTCTTGCCACAAATGCCGACACTGCTCGTCAATGGGTGCAAAGGAACGTGTTGAACTTTTGGCCCAGTGTTAAAATCAAGTACATAGCAGTTGGCAATGAAGTGAGTCCTGTTGGAGGTTCCTCTTGGTATGCCCAATATGTTCTACCTGCTGTCCAAAATGTATACCAAGCTGTAAGGGCTCAAGGCCTCCATGATCAAATCAAGGTTTCAACAGCCATTGACATGACCCTTATAGGAAACTCCTACCCTCCATCACAAGGTTCCTTCAGGGGTGATGTTAGATCCTACCTAGACCCTATAATAGGGTACTTGCTATATGCAAGTGCACCTTTGCTAGTGAATGTGTACCCTTATTTCAGTTACTCTGGTAATCCTCGTGATATATCACTTCCCTATGCTCTTTTCACTTCACCAAATGTTGTGGTGAGGGATGGCCAATATGGGTACCAAAATCTGTTTGATGCTATGTTGGATTCAGTGCATGCAGCCATTGATAACACTAGGATTGGTTACGTTGAGGTGGTTGTGTCTGAGAGTGGGTGGCCCTCAGATGGAGGGTTTGGTGCCACGTATGACAACGCACGTGTGTACTTGGATAACTTGGTTCGTCGTGCTGGAAGAGGAAGCCCTAGAAGGCCTTCGAAGCCTACAGAGACTTATATATTTGCCATGTTCGATGAGAATCAAAAGAGTCCTGAGATAGAGAAACATTTTGGGCTCTTTAAACCCAGCAAAGAGAAGAAGTACCCCTTTGGATTTGGTGCCCAAAGGGATGCAAAGATTGTTGTTGATGAGTTCAATGCAACATATCCCCTTAAGAGTGACATGTAA 1116 0.4418 MASQFPRNQRFSFAAFLLLFQLFTVNLITTADAQIGVCYGMMGNNLPSANEVINLYRSNNIRRMRLYDPNQAALQALRNSGIELILGVPNSDLQGLATNADTARQWVQRNVLNFWPSVKIKYIAVGNEVSPVGGSSWYAQYVLPAVQNVYQAVRAQGLHDQIKVSTAIDMTLIGNSYPPSQGSFRGDVRSYLDPIIGYLLYASAPLLVNVYPYFSYSGNPRDISLPYALFTSPNVVVRDGQYGYQNLFDAMLDSVHAAIDNTRIGYVEVVVSESGWPSDGGFGATYDNARVYLDNLVRRAGRGSPRRPSKPTETYIFAMFDENQKSPEIEKHFGLFKPSKEKKYPFGFGAQRDAKIVVDEFNATYPLKSDM* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2648 371 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 24 355 IPR044965 GO:0004553|GO:0005975
Pvu9g2648 371 SUPERFAMILY (Trans)glycosidases 35 347 IPR017853 -
Pvu9g2648 371 Gene3D Glycosidases 34 349 - -
Pvu9g2648 371 Pfam Glycosyl hydrolases family 17 35 346 IPR000490 GO:0004553|GO:0005975
Pvu9g2648 371 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE B 24 355 - -
Pvu9g2648 371 ProSitePatterns Glycosyl hydrolases family 17 signature. 267 280 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2648 Pvu-Chr9 36945560 36948126 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2648 41 357 Glycoside Hydrolase AT4G16260 63.950 1.25e-145 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2648 - - ccaj:109791097 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2648 9 36945560 36948126 Pvu9g2648 9 36945560 36948126 ECH