Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2647 TTCTATCTAATTTTTCCGGATGAGTACAATGAAAAGGCTTTATGCAAACTCTTTCAAAGATGGGGAAGGGTCTTAGATATTTTCATTTCCAGGAAATTAAACACCAGAAAACAACATTTCGGGTTTGTTAGGTTTCAAAGGGTGGGGGACACACATGTCTTGGAAAGAAAATTGGATTCAATATGGATAGGAACTTGGAAGATGAGGGTTAACATACCTAAATACTATAAGAACGAGTTTCCAAAGAACAAAAGGAATTCTAAACCAAAGACGAAGACTGTAGTAGATCGGAAAGTTTGGAGCAAGAAGATTCAACAACATTCTTTTGCACAGGTTGTTAAAAGTGGGAGCGAGAGTTTTTCCCAGGGAGCTTCAGAAGATGACATGTTTCACTTAGGGTCAAGAGTTTCCAAGGCAACTAATGTGCAGTCCATCAAGGAAAGCTTCCTTTTGGGACGGTTCAATTTCGTTAGAGTAAGATACCTTGGGGAAAAGTATGTGTTTTTGTCATGTGAAGATGAGAGCATAATTGTGAAATCTATATAA 546 0.3773 FYLIFPDEYNEKALCKLFQRWGRVLDIFISRKLNTRKQHFGFVRFQRVGDTHVLERKLDSIWIGTWKMRVNIPKYYKNEFPKNKRNSKPKTKTVVDRKVWSKKIQQHSFAQVVKSGSESFSQGASEDDMFHLGSRVSKATNVQSIKESFLLGRFNFVRVRYLGEKYVFLSCEDESIIVKSI* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2647 181 PANTHER RNA RECOGNITION MOTIF 11 166 - -
Pvu9g2647 181 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 11 166 - -
Pvu9g2647 181 CDD RRM_SF 5 71 - -
Pvu9g2647 181 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 5 51 IPR000504 GO:0003723
Pvu9g2647 181 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 1 75 IPR000504 GO:0003723
Pvu9g2647 181 SUPERFAMILY RNA-binding domain, RBD 6 146 IPR035979 GO:0003676
Pvu9g2647 181 Gene3D - 5 104 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2647 Pvu-Chr9 36938335 36938921 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2647 - K12891 pvu:PHAVU_009G256300g 370.163