Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2614 ATGGGAATTTTCACTTCTGAAAGCGATCTAGTTTCTGCAGTGGCACCTGCAAGACTATACAAAGCCATTGTCTTAGATTCTGGCAATTTTTTTCCCAAAGCTTTACCAAACTTTGTTAAAAGTGTTGAAATCATTGAAGGAGATGGAGGGCCAGGAACCATTAAGAAGTTCAGTCTTCCTGAAGGGTATGTGAAGCAAAAGGTGGATGTGGTCGATGAAGATAACTATGTGTATCACTACACAATAGTTGAAGGCAATCTTCTCACAGAGCCATTGGAGAAGGTGTCTAATGAGTACAAATTGGTGGCAAACCCTGATGGAGGATGCATTGTGAAGACCACACGCAAATACTACACAAAAGGAGATGCTGAACTCACAGAAGAGTTCCTGAAGTCTACTAAGGAGATGTCTGCAGTGTTTGCCAAGGCTGTTGATGATTATCTTTTGGCTAATCCTGATTACAACTAA 468 0.4103 MGIFTSESDLVSAVAPARLYKAIVLDSGNFFPKALPNFVKSVEIIEGDGGPGTIKKFSLPEGYVKQKVDVVDEDNYVYHYTIVEGNLLTEPLEKVSNEYKLVANPDGGCIVKTTRKYYTKGDAELTEEFLKSTKEMSAVFAKAVDDYLLANPDYN* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2614 155 PANTHER - 1 155 - -
Pvu9g2614 155 PANTHER NODULIN-13 1 155 - -
Pvu9g2614 155 CDD Bet_v1-like 4 148 - -
Pvu9g2614 155 Pfam Pathogenesis-related protein Bet v 1 family 3 151 IPR000916 GO:0006952
Pvu9g2614 155 SUPERFAMILY Bet v1-like 2 155 - -
Pvu9g2614 155 ProSitePatterns Pathogenesis-related proteins Bet v I family signature. 85 117 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pvu9g2614 155 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pvu9g2614 155 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pvu9g2614 155 PRINTS Major pollen allergen Bet V1 signature 62 81 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pvu9g2614 155 PRINTS Major pollen allergen Bet V1 signature 81 94 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pvu9g2614 155 PRINTS Major pollen allergen Bet V1 signature 106 122 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pvu9g2614 155 PRINTS Major pollen allergen Bet V1 signature 140 150 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pvu9g2614 155 Gene3D - 2 155 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2614 Pvu-Chr9 36578547 36579550 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2614 - - gmx:100306363 220.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2614 9 36578547 36579550 Pvu9g2614 9 36578547 36579550 ECH
Pvu9g2614 9 36578547 36579550 Pvu3g1140 3 27442139 27442923 PCT