Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2612 ATGGGCAGTGCAGGCCAGCATAGCCGGCAGCCACCGCTATATAAAGAGTTCCCTTTCCCACATCAGAGACCACAGAGCAGAAACCACCACTTAAGAGCTGAAACCACCACTAAGAGCAGAAGAATGGGAGTATTTAGACAGGATTATGATACCCCTGTTGCAGTGCCTCCTTCTAGGCTTTTCAAAGCCATGACATTAGATTTCCATAACCTCTTCCCAAAGCTTGTGGATACCATCCACAGTATTGAATTCACCCAAGGAAATGGTGCTCCTGGCACCATCAAGAAGATCACCACCATTGAAGGTGAAGAAAGCAAGTATGTGCTGCACAGAGTGGATGCAATTGATGAGAGTAGCTTTGTATACAACTTCAGCATAATTGATGGCACTGCTTTGCCTCAGACATTGGAGAAGATCTCATTCCAGACCCAACTGCTTGAAAGCTCCAATGGAGGAACAATTAGGAAGGTCAATGCCAATTTCTTCACAAAAGGTGAAGCTCTTCTCACTGATGAGGACCTCAAGGCTAACCAAGCCAAGATCCAAGGACTTGTCAAGCTTGTTGAAGCATATCTCTTGGCAAATCCTCATTACTGA 597 0.4539 MGSAGQHSRQPPLYKEFPFPHQRPQSRNHHLRAETTTKSRRMGVFRQDYDTPVAVPPSRLFKAMTLDFHNLFPKLVDTIHSIEFTQGNGAPGTIKKITTIEGEESKYVLHRVDAIDESSFVYNFSIIDGTALPQTLEKISFQTQLLESSNGGTIRKVNANFFTKGEALLTDEDLKANQAKIQGLVKLVEAYLLANPHY* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2612 198 Gene3D - 43 198 IPR023393 -
Pvu9g2612 198 PANTHER PATHOGENESIS-RELATED PROTEIN 10 42 198 - -
Pvu9g2612 198 SUPERFAMILY Bet v1-like 44 198 - -
Pvu9g2612 198 MobiDBLite consensus disorder prediction 1 43 - -
Pvu9g2612 198 MobiDBLite consensus disorder prediction 27 43 - -
Pvu9g2612 198 Pfam Pathogenesis-related protein Bet v 1 family 44 195 IPR000916 GO:0006952
Pvu9g2612 198 PRINTS Major pollen allergen Bet V1 signature 44 64 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pvu9g2612 198 PRINTS Major pollen allergen Bet V1 signature 67 77 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pvu9g2612 198 PRINTS Major pollen allergen Bet V1 signature 90 99 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pvu9g2612 198 PRINTS Major pollen allergen Bet V1 signature 106 125 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pvu9g2612 198 PRINTS Major pollen allergen Bet V1 signature 125 138 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pvu9g2612 198 PRINTS Major pollen allergen Bet V1 signature 150 166 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pvu9g2612 198 PRINTS Major pollen allergen Bet V1 signature 184 194 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pvu9g2612 198 CDD Bet_v1-like 50 192 - -
Pvu9g2612 198 PANTHER - 42 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2612 Pvu-Chr9 36565596 36566550 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2612 - - pvu:PHAVU_009G252800g 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2612 9 36565596 36566550 Pvu9g2612 9 36565596 36566550 ECH
Pvu9g2612 9 36565596 36566550 Pvu3g1134 3 27140302 27141134 PCT