Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2610 ATGGGCCTGCTATCTCATGTTAGGTCCACAGTTGTGGGAAAATGTTGCAAAGGAAACTTTGGCATATCTAGATTCTTGCAGTCGAATGATTATCAACGGAAGTTGATTTTATCCAGTGGTAGAGAATCATACTATGAACATTCTAGCAAGAGATCATATTCTTCCCCAACTGAAACTGAGAGTATGATTGCAAGTACTAGAACTAAGATGCCAAATATGGGGGGTGAAGGATTCGCCTTTTCATCTTATTTATCAACTGTCAACAGAAATTCAAGAATGATTCATTTCAGTAGTTGCCTCAAAACCCCTGTGAAATCTGAACAGGTTAATCCAAATTCTGAAATCCAGAAAATCACTACTGGGATGGACAAGATGCCAAGTCTTCTAAGATGGGTGGGTGGAGGCATCCCTGCGGTAGCTTTCTGTGATGCACCAGAACCATGGCAACTAGGATTTCAAGATGCAGCAACACCTATAATGCAAGGAATAATGGACTTACATCACGACATCTTTTTCTTCCTTGTTCAGATTGCGGTTTTTGTATTATGGGTTATGGCTCGTGCTTTATGGTGTTTCAGGCATAAAGTTAGTCCAATCCCACAAAGGATTGTTCATGGAACCACAATTGAGATTCTTTGGACCATATTTCCTAGTATCATCCTCATGTTCATCGCTATACCATCATTCACTTTGTTATACTCAATGGACGATGTTGTAGTTGATCCAGCCATTACTATCAAAGCTATTGGACATCAATGGTATTGGAGTTATGAGTATTCAGACTATAACAATACGGATGAGCAATCACTTGCTTTTGACAGTTATATGATTCCAGAAGATGATCTAGAATTGGGTCAATTGCGTTTATTAGAAGTTGACAACAGAGTGGTAGTACCAGCAAAGACTCATCTGCGTGTTCTTATAACATCAGCTGATGTACTTCATAGCTGGGCAGTGCCTTCCTTGGGCGTTAAATGCGATGCAGTACCCGGTCGTTTGAATCAGATCTCTACTTTTATACAACGAGAAGGTGTTTATTATGGGCAGTGCAGTGAAATTTGTGGAACTAATCATGCATTTATGCCTATAGTTGTAGAAGCAGTTTCTACCGAAAACTATGGTTCCTGGGTTTCCAATCAAATCCAATAG 1149 0.3977 MGLLSHVRSTVVGKCCKGNFGISRFLQSNDYQRKLILSSGRESYYEHSSKRSYSSPTETESMIASTRTKMPNMGGEGFAFSSYLSTVNRNSRMIHFSSCLKTPVKSEQVNPNSEIQKITTGMDKMPSLLRWVGGGIPAVAFCDAPEPWQLGFQDAATPIMQGIMDLHHDIFFFLVQIAVFVLWVMARALWCFRHKVSPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFTLLYSMDDVVVDPAITIKAIGHQWYWSYEYSDYNNTDEQSLAFDSYMIPEDDLELGQLRLLEVDNRVVVPAKTHLRVLITSADVLHSWAVPSLGVKCDAVPGRLNQISTFIQREGVYYGQCSEICGTNHAFMPIVVEAVSTENYGSWVSNQIQ* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2610 382 ProSitePatterns CO II and nitrous oxide reductase dinuclear copper centers signature. 313 361 IPR001505 GO:0005507
Pvu9g2610 382 Pfam Cytochrome C oxidase subunit II, periplasmic domain 244 368 IPR002429 GO:0004129|GO:0005507|GO:0016020
Pvu9g2610 382 Gene3D - 241 380 IPR008972 -
Pvu9g2610 382 PRINTS Cytochrome c oxidase subunit II signature 205 217 - -
Pvu9g2610 382 PRINTS Cytochrome c oxidase subunit II signature 217 237 - -
Pvu9g2610 382 PRINTS Cytochrome c oxidase subunit II signature 240 259 - -
Pvu9g2610 382 PRINTS Cytochrome c oxidase subunit II signature 288 309 - -
Pvu9g2610 382 PRINTS Cytochrome c oxidase subunit II signature 312 332 - -
Pvu9g2610 382 PRINTS Cytochrome c oxidase subunit II signature 332 349 - -
Pvu9g2610 382 PRINTS Cytochrome c oxidase subunit II signature 350 367 - -
Pvu9g2610 382 SUPERFAMILY Cytochrome c oxidase subunit II-like, transmembrane region 137 238 IPR036257 -
Pvu9g2610 382 TIGRFAM CoxB: cytochrome c oxidase, subunit II 156 377 IPR014222 GO:0016021|GO:0016491
Pvu9g2610 382 Pfam Cytochrome C oxidase subunit II, transmembrane domain 145 231 IPR011759 GO:0016021|GO:0022900
Pvu9g2610 382 Gene3D - 135 239 IPR036257 -
Pvu9g2610 382 ProSiteProfiles Cytochrome oxidase subunit II copper A binding domain profile. 241 379 IPR002429 GO:0004129|GO:0005507|GO:0016020
Pvu9g2610 382 SUPERFAMILY Cupredoxins 241 380 IPR008972 -
Pvu9g2610 382 ProSiteProfiles Cytochrome oxidase subunit II transmembrane region profile. 144 239 IPR011759 GO:0016021|GO:0022900
Pvu9g2610 382 CDD CcO_II_C 242 376 IPR034210 -
Pvu9g2610 382 PANTHER CYTOCHROME C OXIDASE, SUBUNIT II 136 381 IPR045187 GO:0004129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2610 K02261 - gmx:100782702 583.948