Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2576 ATGTTTGAAGAGAATCAACTTTATGATGGCATGGATCCAGAGGCTGTTGCTTTCCAATGCAAGATCATGGCCAAATCAGGATTCAGTGAGCTAACATCCATTTCTCCATCTCTTGCACAGATACCCAAAATCAAGGCTCTGTCCTTTGCCATTGAGGAGGCTGAGACAATCATGTGTTCAGTGATCAAAAACCTGTTTGAGAAAAACAAGATAAACCCTAAAACCATTGACATACTCATCACTAATAGTAGTGTCTTCTGCCCCACCCCATCTCTTAGTGCCATGGTGGTTAACAAGTTCAGAATGAGGAGCAACATCATGAGTTTCAACCTATCTGGTATGGGATGCAGTGCTGGAATTATTTCAATGAGTCTAGCTAAAGACTTGTTGAGAGTTCATAGGAACTCACTAGCTTTAATAGTAAGCACAGAGACTCTGAGTCTGAATTGGTACACAGGTAAAGTCCCTTCTATGCTGCTATCCAATTGTCTATTCAGAATGGGTGGGGCAGCTATATTGATGTCTAGTAGGGTCCAAGATAAGCACAAGGCAAAGTATAAACTACAGCATATTGTTAGAACAATCACTGCACAGGATGATGAATCCCATGGCTGTGTTTACCAACAAGGGGATCCAGAGGACAAAGAAGGCGTATCCATATCAAAGAGCATTGTCAATGTGTCTGGAGATGCACTGAAGAAAAATATAGCTTCACTAGGACCATTGGTTCTACCTCTGAGGGAGCAATTCTTGTATTTATTTTCTATTATTTGTCGCAAAATGTGGAGTACAAGAAGGATAAGCATCTATACTCCAAATTTCAACCTTGCTTTTGAGCATTTCTGTATACATTCAGGGGGAAGAGCCATCATTCAAGCAGTTGAAAGAAACTTAAGGCTAAGGAAACAGGACGTCGAGCCATCAACCATGACTCTCTACAGGTTTGGGAATATTTCATCATCTTCAATTTGGTATGAGCTTAGCTACATAGAAGCAAAAGGGAGGATGAAATGTGGGGATAGGGTGTGGCAAATTGCCTTTGGAAGTGGATTCAAGTGTAACAGTGCAGTGTGGAAATGTGTATGTGACATGAAGCCAAACACCGCCACTGCATGGAGGGATACAATTCACTTGTACCCTGTGGATATTATGAGAACAAACTGA 1164 0.4132 MFEENQLYDGMDPEAVAFQCKIMAKSGFSELTSISPSLAQIPKIKALSFAIEEAETIMCSVIKNLFEKNKINPKTIDILITNSSVFCPTPSLSAMVVNKFRMRSNIMSFNLSGMGCSAGIISMSLAKDLLRVHRNSLALIVSTETLSLNWYTGKVPSMLLSNCLFRMGGAAILMSSRVQDKHKAKYKLQHIVRTITAQDDESHGCVYQQGDPEDKEGVSISKSIVNVSGDALKKNIASLGPLVLPLREQFLYLFSIICRKMWSTRRISIYTPNFNLAFEHFCIHSGGRAIIQAVERNLRLRKQDVEPSTMTLYRFGNISSSSIWYELSYIEAKGRMKCGDRVWQIAFGSGFKCNSAVWKCVCDMKPNTATAWRDTIHLYPVDIMRTN* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2576 387 SUPERFAMILY Thiolase-like 189 360 IPR016039 GO:0016746
Pvu9g2576 387 CDD CHS_like 17 358 - -
Pvu9g2576 387 PANTHER 3-KETOACYL-COA SYNTHASE 1 384 IPR012392 GO:0006633|GO:0016020|GO:0016747
Pvu9g2576 387 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 279 359 IPR013747 -
Pvu9g2576 387 Pfam FAE1/Type III polyketide synthase-like protein 6 261 IPR013601 GO:0006633|GO:0016020|GO:0016747
Pvu9g2576 387 SUPERFAMILY Thiolase-like 12 177 IPR016039 GO:0016746
Pvu9g2576 387 PANTHER 3-KETOACYL-COA SYNTHASE 21-RELATED 1 384 - -
Pvu9g2576 387 Gene3D - 15 360 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2576 Pvu-Chr9 36223913 36225076 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2576 11 381 Acyl Lipid Metabolism Gene Families AT1G71160 56.873 3.58e-157 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2576 K15397 - gmx:100783404 729.554