Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2565 ATGCTGGAGCGGTGCCTGGGGACGCGGCGCGTGCGGCAGATTCAGCGCGCGTGCCGGCACAGTACGGTCACTTTCCTCTGCCTATTCCTCACGGTGGTCGTCCTCCGCGGCACAATCGGCGCCGGAAAGTTCGGTACGCCGGAGCAGGACTTCGACGAGATCCGCTACCACATCTCCGCCGCCCGCGCCCGCCGCGTCCTCGAAGAGACCAAACCCGACGCCGGTTCCAACGCCGATTCCAACCCTAACAACTACGCCACGTTCGATCTCTCCAAGATCCTCGTGGACGAGCCTCCCAGCGAGGACGAAAAGCGTGACCCCAACGCGCCCTACACTCTGGGACCCAAAATCTCCGATTGGGATGAACAGCGCCGAGCCTGGCTCCGAGCCAACCCTGAGTACCCTAACTTCATCCGACCCAACAAGCCACGTGTACTCCTAGTCACCGGTTCGTCCCCCAAACCGTGTGAAAACCCTGTCGGTGATCACTACCTTGTGAAATCGATCAAGAACAAGATTGACTATTGCAGGGTTCATGGGATTGAGATTTTCTACAACATGGCTCTTCTGGACGCTGAGATGGCAGGGTTTTGGGCCAAGCTTCCCTTGATTCGGAAACTCTTGCTCTCGCACCCTGAAGTGGAGTTTCTCTGGTGGATGGACAGTGATGCAATGTTCACCGACATGGCTTTTGAGGTTCCATGGGAGAGGTACAAGGATTCCAACTTTGTTATGCATGGGTGGAATGAGATGGTGTATGATGAGAAAAATTGGATTGGGTTGAACACTGGGAGTTTTCTGTTGAGGAATTGTCAATGGTCTTTGGATATTCTTGATGCTTGGGCTCCCATGGGGCCTAAAGGGAAGATAAGGGATGAGGCTGGGAAAGTGCTCACTAGGGAGCTCAAGAATAGGCCTGTTTTTGAAGCTGACGATCAATCTGCCATGGTTTATTTGTTGGCCACTGGGAGGGAAACATGGGGTGACAAGGTTTACCTTGAGAATCATTATTACTTGCACGGGTATTGGGGGATTTTGGTGGACCGTTACGAGGAGATGATTGAGAATTATCACCCGGGGCTTGGGGATCATAGGTGGCCTTTGGTGACCCACTTTGTGGGGTGCAAGCCTTGTGGGAAGTTTGGTGATTACCCTGTGGAGAGGTGCTTGAAGCAGATGGATAGGGCTTATAATTTTGGGGATAACCAGATTTTGCAGATGTATGGCTTCACTCACAAGACCCTTGCAAGTCGCAGGGTGAAGAAAGTGAGGAATGACACTGGAAACCCTCTTGAGATCAAGGATGATCTTGGGTTGCTTCACCCTGCTTTCAAAGCTATCAAGCTTCCTTCTTCTTGA 1359 0.5254 MLERCLGTRRVRQIQRACRHSTVTFLCLFLTVVVLRGTIGAGKFGTPEQDFDEIRYHISAARARRVLEETKPDAGSNADSNPNNYATFDLSKILVDEPPSEDEKRDPNAPYTLGPKISDWDEQRRAWLRANPEYPNFIRPNKPRVLLVTGSSPKPCENPVGDHYLVKSIKNKIDYCRVHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDSNFVMHGWNEMVYDEKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKIRDEAGKVLTRELKNRPVFEADDQSAMVYLLATGRETWGDKVYLENHYYLHGYWGILVDRYEEMIENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAYNFGDNQILQMYGFTHKTLASRRVKKVRNDTGNPLEIKDDLGLLHPAFKAIKLPSS* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2565 452 MobiDBLite consensus disorder prediction 97 116 - -
Pvu9g2565 452 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 141 295 IPR029044 -
Pvu9g2565 452 PANTHER BNACNNG19100D PROTEIN 4 450 - -
Pvu9g2565 452 Pfam galactosyl transferase GMA12/MNN10 family 142 381 IPR008630 GO:0016021|GO:0016757
Pvu9g2565 452 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 4 450 IPR008630 GO:0016021|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2565 Pvu-Chr9 36109061 36110419 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2565 1 452 Glycosyltransferase AT3G62720 76.638 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2565 K08238 - gmx:100818287 896.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2565 9 36109061 36110419 Pvu9g2565 9 36109061 36110419 ECH