Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2553 ATGGAGGGGGAACCCAGCCAGCTCAAACGGGCTGCCATTGATGCCTCCGCTGGAGCTCTTTCCGGTGCTGTATCCAGGACCGTCACCTCGCCTCTTGATGTTATTAAGATTAGGTTTCAGGTTCAACTAGAACCCACATCTTCATGGAATTCACTACGCAAGGATTTTACTACTACTTCAAAATATACCGGCATGGTTCAAGCAAGCAAAGATATTTTCAGAGAAGAAGGCATGCGGGGTTTTTGGCGGGGGAATGTGCCAGCTTTGCTCATGGTTATGCCATATACAAGTATACAATTTACTGTTCTACACATGTTGAAGTCTTATGCCTCTGGTTCTTCCAAAACAGAGAATCACATGAGTTTGAGCCCTTATCTATCCTATATGAGTGGGGCAATAGCTGGGAGTGCTGCTACTCTAGGCTCATATCCCTTTGATCTTCTCCGAACCATATTAGCTTCCCAGGGTGAACCAAAGGTTTATCCAAACATGAGAACAGCATTTGTCGATATTGTCCAGACTCGTGGCTTCCCAGGCTTGTATGCTGGATTGTCACCAACCCTAGTTGAGATCATACCATATGCAGCTCTACAATTTGGCACCTATGACACATTTAAACGTTGGACCATGGCATGGAATCATCGTCAATATTCAAATCCTACTGCAGAAAACATTTCCAGCTTTCAGCTTTTCCTGTGTGGAGTGGGTGCAGGAACATCTGCCAAGCTCGCCACTCATCCACTTGATGTGGTCAAGAAAAGATTTCAGATTGAAGGTCTGCAAAGGCATCCAAGATATGGAGCTCGGGTTGAACACCATGCATACAACAATATGTTTGATGCCATAAAGCGAATATTACAAAAGGAGGGTTGGGCTGGTCTATATAAAGGGATAGTCCCATCAACTGTCAAAGCTGCACCAGCTAATGCTGTAACATTTGTAGCCTATGAATTGACATCAGATTGGCTGGAATCTCTTTTGACTTGA 987 0.4448 MEGEPSQLKRAAIDASAGALSGAVSRTVTSPLDVIKIRFQVQLEPTSSWNSLRKDFTTTSKYTGMVQASKDIFREEGMRGFWRGNVPALLMVMPYTSIQFTVLHMLKSYASGSSKTENHMSLSPYLSYMSGAIAGSAATLGSYPFDLLRTILASQGEPKVYPNMRTAFVDIVQTRGFPGLYAGLSPTLVEIIPYAALQFGTYDTFKRWTMAWNHRQYSNPTAENISSFQLFLCGVGAGTSAKLATHPLDVVKKRFQIEGLQRHPRYGARVEHHAYNNMFDAIKRILQKEGWAGLYKGIVPSTVKAAPANAVTFVAYELTSDWLESLLT* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2553 328 Gene3D Mitochondrial carrier domain 6 325 IPR023395 -
Pvu9g2553 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 9 109 IPR018108 -
Pvu9g2553 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 208 IPR018108 -
Pvu9g2553 328 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 4 327 - -
Pvu9g2553 328 PANTHER SOLUTE CARRIER FAMILY 25 4 327 - -
Pvu9g2553 328 Pfam Mitochondrial carrier protein 14 110 IPR018108 -
Pvu9g2553 328 Pfam Mitochondrial carrier protein 225 323 IPR018108 -
Pvu9g2553 328 Pfam Mitochondrial carrier protein 123 209 IPR018108 -
Pvu9g2553 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 322 IPR018108 -
Pvu9g2553 328 SUPERFAMILY Mitochondrial carrier 10 317 IPR023395 -
Pvu9g2553 328 PRINTS Mitochondrial carrier protein signature 14 27 IPR002067 GO:0055085
Pvu9g2553 328 PRINTS Mitochondrial carrier protein signature 27 41 IPR002067 GO:0055085
Pvu9g2553 328 PRINTS Mitochondrial carrier protein signature 84 104 IPR002067 GO:0055085
Pvu9g2553 328 PRINTS Mitochondrial carrier protein signature 137 155 IPR002067 GO:0055085
Pvu9g2553 328 PRINTS Mitochondrial carrier protein signature 181 199 IPR002067 GO:0055085
Pvu9g2553 328 PRINTS Mitochondrial carrier protein signature 234 256 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2553 Pvu-Chr9 36035727 36040881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2553 4 328 Organic Solute Cotransporters AT3G21390 72.424 0.0 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2553 K15108 - gmx:100783563 583.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2553 9 36035727 36040881 Pvu9g2553 9 36035727 36040881 ECH
Pvu3g1083 3 25835187 25839809 Pvu9g2553 9 36035727 36040881 PCT