Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2546 CTCACTGTGCTGCAGCAAGCAAAGGGAGGCCCAGTGGGACTTCAGATACTCAAAGACAATACATGGGTTCCTATTCAGCCAATTCCAAATGCTCTTGTCATTAACATTGGAGACACAATAGAAGTTCTTACAAATGGAAAATACAGGAGTGTGGAGCATAGAGCAGTGGCTCATGAGGAGAAAGATAGACTCTCAATTGTGACATTTTTTGCTCCTAGCTATGATGTGGAGCTTGGTCCAATGCCAGAATTTGTGGATGAAAACCACCCATGCAAGTATAGAACATACAATCATGGAGAGTACAGTAAACACTATGTAACCAACAAGTTACAAGGGAAAAAGACACTGGACTTTGCCAAGATCCAAACCAAAAACACAAACTAG 384 0.4167 LTVLQQAKGGPVGLQILKDNTWVPIQPIPNALVINIGDTIEVLTNGKYRSVEHRAVAHEEKDRLSIVTFFAPSYDVELGPMPEFVDENHPCKYRTYNHGEYSKHYVTNKLQGKKTLDFAKIQTKNTN* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2546 127 Gene3D - 1 127 IPR027443 -
Pvu9g2546 127 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 1 72 IPR005123 -
Pvu9g2546 127 Pfam 2OG-Fe(II) oxygenase superfamily 2 72 IPR044861 -
Pvu9g2546 127 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 1 124 - -
Pvu9g2546 127 SUPERFAMILY Clavaminate synthase-like 1 113 - -
Pvu9g2546 127 PANTHER PROTEIN SRG1 1 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2546 Pvu-Chr9 35982449 35983254 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2546 1 121 Glycosyltransferase AT5G59530 42.742 1.44e-25 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2546 - - pvu:PHAVU_009G2462000 265.003