Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2545 ATGCCTCCTGTTCCTATTTCTCCTGTCAAAGTTGGGCACATTGATGATGTCCAAGAGCTAAGAAAAACTAAGCCAAGGACAATTCCTCAAAGATTTGTACGAGACATGACAGAAAGACCAACACTTTCTACTACACCTCTCCCCCCATCAAATACTCACATGCCTGTCATTGATTTCTCTAAGTTTACCAATGGAAACAAAGAGGAAGTTCTTAGTGAAATTTTCAATCTTGCAACTGCTTGTGAAGAGTGGGGATTTTTTCAGGTAATTAATCATGAGATTGATCTCAATCTGGTAGAGAGAATAGAGAACCTGAGCAGGGAGTTTTTCATGCTACCTTTGGAAGAGAAACAGAAATACCCTATGGCTCCTGGTACTGTTCAAGGGTATGGACAAGCTTTTGTTTTCTCAGAGGACCAGAAGTTGGACTGGTGCAACATGTTTGCTCTTGGACTTGAACCTGAATATGTTAGGAACCCAAATCTATGGCCAAAAAGACCAGAAAGATTCAG 512 0.4082 MPPVPISPVKVGHIDDVQELRKTKPRTIPQRFVRDMTERPTLSTTPLPPSNTHMPVIDFSKFTNGNKEEVLSEIFNLATACEEWGFFQVINHEIDLNLVERIENLSREFFMLPLEEKQKYPMAPGTVQGYGQAFVFSEDQKLDWCNMFALGLEPEYVRNPNLWPKRPERF 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2545 170 Gene3D - 11 170 IPR027443 -
Pvu9g2545 170 SUPERFAMILY Clavaminate synthase-like 15 170 - -
Pvu9g2545 170 PANTHER PROTEIN SRG1 10 170 - -
Pvu9g2545 170 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 10 170 - -
Pvu9g2545 170 Pfam non-haem dioxygenase in morphine synthesis N-terminal 55 165 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2545 Pvu-Chr9 35981369 35982069 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2545 17 109 Glycosyltransferase AT5G59530 32.632 2.80e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2545 - - pvu:PHAVU_009G2462001 345.895