Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2538 ATGACCCCTTCTGTCAAAAACCACACAACTGAAATTCAATTCACTCATCATCGTCAAGGTGGAGAAGAGCTACCACATTTGCATGCAAATTCAGCTCCTCCTATGGAAAACAACACCAACACAAAAATGCAGCTGCATGCAGACCAAAAGTCTACCACTAACAAGAGGTACCTACCCCTTTTGGTGATTAACTATGCCATGCTCTTTGTGGGTTCTCTTTCTGCTAGCTTGCTCTCTAAGTATTACTTCATCCACAAAGGTTCAAGCATTTGGGTTTCAACTTGGGTTCAAACCGCTGGCTTTCCTCTCTTGATGATCCCAATTTGTGTCCCTTATCTCTTTAAATTCACCAAGAGGGTGCCCTTCACTGATTTCACTCCAACAATGTTAATTCTCTCAGTTTCAGTTGGTATCATGTTGGGATTCAACAACCTTTTCTTCTCATGGGGAAATTCGTATCTTCCCATTTCAACCTCTGCCCTTTTGCTGTCTTCCCAACTTGTGTTCAACCTTCTCTTCTCTGTCATCATTGTGAACCAAAAAATGACCTTTTCAAACGTTAACTGTGTGATCCTTCTCACCCTGAGCTCCATCCTCCTAGCCTTGGACTCCAGCAACGAGAGGCCAGAGGGGCTCACGCAGAGGAACTACTTCTTTGGATTCTTCTGCACCATAGCCGCAGGGCTGTTGTTTGCATTCTACTTGCCTCTGATGGAGAAGATCTACAAGAGGGTGAACTGCTACGAAATGGTGATGGAAATGCAGCTTGTGATGGAGTTTTCAGCAACAACAATGGCCACAATTGGCATGGCAAGTGGGGGTGGATTTGCCAAAATGATCTCCGAGAGTACAATGGTGTTTGACAAGGGATGCATGGTTTATTGGGTGACAGTGGTGGCAAATGTGGTGACTTGGCAGCTCTGTTTCATGGGAACTGCAGGAATGGTGTTCTTGACATCTTCACTGACAGGGGGGATTTGCATGACAGCATTGTTGTCCATGAATGTGTTAGGAGGAGTTCTGGTTTACAAAGATGCATTTGGTGGTTTCAAAGCTGTGTCCACCATTCTCTGCATTTGGGGGTTCCTCTCTTATGTCTATGGCGTCCACAAAGTCAACAGAAAGGAGCACCACAAAGCTCTCACCGGAAACAAGAACAGCAGTGACTCATCCACCGACATCATCAACGTTGTGGCTTACTGA 1203 0.453 MTPSVKNHTTEIQFTHHRQGGEELPHLHANSAPPMENNTNTKMQLHADQKSTTNKRYLPLLVINYAMLFVGSLSASLLSKYYFIHKGSSIWVSTWVQTAGFPLLMIPICVPYLFKFTKRVPFTDFTPTMLILSVSVGIMLGFNNLFFSWGNSYLPISTSALLLSSQLVFNLLFSVIIVNQKMTFSNVNCVILLTLSSILLALDSSNERPEGLTQRNYFFGFFCTIAAGLLFAFYLPLMEKIYKRVNCYEMVMEMQLVMEFSATTMATIGMASGGGFAKMISESTMVFDKGCMVYWVTVVANVVTWQLCFMGTAGMVFLTSSLTGGICMTALLSMNVLGGVLVYKDAFGGFKAVSTILCIWGFLSYVYGVHKVNRKEHHKALTGNKNSSDSSTDIINVVAY* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2538 400 MobiDBLite consensus disorder prediction 1 25 - -
Pvu9g2538 400 Pfam Purine nucleobase transmembrane transport 60 375 - -
Pvu9g2538 400 PANTHER TRIOSE-PHOSPHATE TRANSPORTER FAMILY PROTEIN 29 383 - -
Pvu9g2538 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 113 205 - -
Pvu9g2538 400 PANTHER OS09G0467300 PROTEIN-RELATED 29 383 IPR030182 GO:0015211|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2538 Pvu-Chr9 35912286 35913870 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2538 36 368 Organic Solute Cotransporters AT1G30840 61.791 4.62e-136 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2538 - - gmx:100794553 560.066