Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2531 ATGAACAGAAGAGAAGAAGAGAAACCAGCAATGCCTTCTCCATCATCTCATTATGGATTTTCGATTACCCAAAATGCCCTTTCACTCTTTTTCTTATTTTACCTCCTAACGGTCCCACCTCCCTCCACCGCTCTCAACTTCACCGCGCTCCTCTCCACCGTGCCGGACCTCTCCCAATTCACCGCGCTCCTCGCCTCCGCAACGCCTCTTCTCGCGGATCTCTCCGACCGCTCCTCCCTCTCCATCCTCGCCGTCCCCAACGCCTATCTCGCCGCCGACGACCACCTCGCCCGCCACCACCTCTCCCCCGCCGCCCTCGCTGATGTCCTCCGCTACCACGTCCTCCTCCAGTTCCTCTCATGGTCAGACCTCCGCGCCCTCCCCCCCGCCGGGAAACTCGTCACCACGCTCCTCCAAACAACCGGACGCGCCACCGACAACTTCGGCTCCGTGAACCTCACGCGCGACCCCCAATCCGGCCTCGTCTCGATCCGCTCCCCCGCCCCCTACTCCCCCTCGAACGTCACCGTTTTGTCCCTCGTCAAAACCCTACCCTACAACGTCACCATTTTCGCCGTCAATTCCCTCCTCATCCCCTACGGCCTTGACCTCATGGCATCCGAAACCCGCCCCAACATCGTCCTCAACATCACCAAAGCCCTAATCGACGGCCACAACTTCAACGTCGCCGCCTCCATGCTTGCGGCCTCCGGCGTAGTTCAGGAATTTGAGGCTGATGAGGGTGGTGCTGGAATCACTCTTTTCGTACCTGTGGATGATGCCTTTGCCGATCTTCCACCCTCTGTTGCCCTTCAGTCTCTGCCTGCAGATAAAAAAGGGGTGGTTCTTAAATTCCATGTTCTTCATTCCTATTACCCTCTTGGCTCGCTTGAATCAGTTGTTAACCCCTTCCAACCCACCCTCGCTACTGAGGCCATGGGTGCTGGTAGCTTCACACTCAACATTTCGCGTGTGAATGGCTCTGTTGCCATCAACACCGGCATTGTGCAGGCCTCAGTTACGCAGACCGTCTTTGATCAGAACCCTGTTGCCATTTTTGGGGTTTCCAAGGTTCTCTTGCCGAGGGAGATTTTTGGCAGGAATCCAATTGTCACTGCCAAGCCTCTTGAAGGTGCTCCTCCGCCGGATGATGATGCGTTGTCACCAGAGAATTCGCCGGGATTTGGTGGACAGCCCTCGCACCTATCGTCACCGCCGGGGTTTCGCGAAGATGTGCGGTCTCATGGTGGTGGTGGTGGTTCCTTGTCCTTTGTTGTTTTTCTTTGCTGTATAGGATTGTATCTTGTGGTATAG 1314 0.5639 MNRREEEKPAMPSPSSHYGFSITQNALSLFFLFYLLTVPPPSTALNFTALLSTVPDLSQFTALLASATPLLADLSDRSSLSILAVPNAYLAADDHLARHHLSPAALADVLRYHVLLQFLSWSDLRALPPAGKLVTTLLQTTGRATDNFGSVNLTRDPQSGLVSIRSPAPYSPSNVTVLSLVKTLPYNVTIFAVNSLLIPYGLDLMASETRPNIVLNITKALIDGHNFNVAASMLAASGVVQEFEADEGGAGITLFVPVDDAFADLPPSVALQSLPADKKGVVLKFHVLHSYYPLGSLESVVNPFQPTLATEAMGAGSFTLNISRVNGSVAINTGIVQASVTQTVFDQNPVAIFGVSKVLLPREIFGRNPIVTAKPLEGAPPPDDDALSPENSPGFGGQPSHLSSPPGFREDVRSHGGGGGSLSFVVFLCCIGLYLVV* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2531 437 Gene3D FAS1 domain 39 199 IPR036378 -
Pvu9g2531 437 Gene3D FAS1 domain 215 362 IPR036378 -
Pvu9g2531 437 SUPERFAMILY FAS1 domain 43 200 IPR036378 -
Pvu9g2531 437 ProSiteProfiles FAS1/BIgH3 domain profile. 44 197 IPR000782 -
Pvu9g2531 437 Pfam Fasciclin domain 226 361 IPR000782 -
Pvu9g2531 437 ProSiteProfiles FAS1/BIgH3 domain profile. 214 359 IPR000782 -
Pvu9g2531 437 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 30 435 - -
Pvu9g2531 437 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 30 435 IPR033254 -
Pvu9g2531 437 SUPERFAMILY FAS1 domain 221 361 IPR036378 -
Pvu9g2531 437 SMART fasc_3 253 362 IPR000782 -
Pvu9g2531 437 MobiDBLite consensus disorder prediction 372 413 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2531 - - var:108321047 763.066