Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2530 ATGGCCCCGTCCGAGGTTGATGTTGTTTCTTCCTCGTCCTTCGGTTGCGTTCTGAGGGACCGTAACAACCGCGAAGCATGCAGGGAAAGCAACGTGAAGGGCACGCATAATGATCATGCTACGTTACAAAGAAACATCAAGAACTTTGTCATGGACCTTAACACGTGCATGGGGGTGTCCTCTGTTTCCACAACAAACGAAAATGAAAACAACAGCAACACCACCACCACCACCAGCAGCAGCAGCAGCAGCAAGAACAAAGGCGTTAACCAGCGTAAGGCTCTAAAAAATAACCGCCTAGAGAGACTTCGTTTCACACGAGCAAACTCCTTCAACAACGGCAGCAGCAGCAGCAACAACAAAGAGTCTTCCTTGGCCTTGTTGATCAGCCCGAGACACTCACGGCTTCTCGATCGATGGGCAGCTAGACAGGCTCGGGAGATGGTGTCGAATTTGGCGAATGAGGTTGAGTTGTTGTCAATGGATGAAGGTGACATGTTCCCAAGGACACCCAGTTCGTCGGAGGAAGAATCCATCTCCTCAGAGATCCCTAACATGGCTGCCTCTTCCCTTGTTCAGATATGGGAGAAGAGGCTGAAGCAATCTGTTGTCTCCAAAACGAACACATTGGCAGAGAAGATTGGTTCGACCTCTTCTCCCACGAATGAGCATGTCAATGCCTCATTGCCCGAGGAAGAAAGCTTTGATGGACCTTCAGGGAATGAAGAAAGTTCCTTTCCTGAGTGGGAATCAAGTGACCATTCTGTTTCGCCACAGGCGAGGTCTGAGAGTGGTGTCAGTGTTGCTAGCCTCATAAAGAAACTCACTTCTACCGGGCAGAGTCAGAGTTCAACACCTTCTTTTCTTGATGATAATGAACATGAAGGGTATGCTAGTAGTAGTGTGACAAGTTCTCCTTGTAGAGAGCGTGAATGTGGTCAACAACAGCAACCACCTTCAGAACATAAAATTGTTTGTCCGCTGCGAATTAGAGGGCGCCAAGCATTCAATGATTTGCTTATGCAGATGGAGAAGGACAGGCATAGGGAGCTCAACAACTTGGCAGAGCGTGGAGCAGTTTCTAAGTTCGCACAAAGAGGTCGCATTCAGGCATTGCTTCGGATTAAATTATTGCAACGTGACCTGGCGGATAGTCATAGGTCCCACCAGAAATCAACATTATGTGAATTAAACAACAGACAAGCACAAGGGTCTGCAATTATGCAACTAAGGGAAAGATTTACCAGCGGGGTTGAACTTAGAACTACTGTCCAGGCAGAAGTAGCTAACCCAAGAAGTCCTCAAAGAGAGGAAGTTAACAAAACCACTCAATTGGGTAACTCTGCCACCACTGATCAACTCAGAAAAGACACAAGAAACCAGAAAGCTCATGGCAGTGACAATCTCGCCACAAAATCCACACAAAAGTCAGTTTCACATACTAGAATAGATCATAATAATACAAAAGAAGCTTCTCCAAGTTCAGATGTCATGGTCCAAGAAACACATCCACGTTCAGATGCCAAGGCTCTACACAATAACTCAAAAGAAACTAGTGAGGCAACTACATCCATGATTGATTCAAGTATAAATGAGATGACAGACAGGGCAGAGGAGAGTAGCGAAAAGAATGGTATTACTAAAAGTAGTAATGATGAGACAGTGAATGAGAAAGATATTAGTAACCCACAGTATGCTGAATCCAGTTACAAGGAGAAAATAGAAGAGGCAATTGATCAGAACTATGCTGAAAGCAGTTATGGTGATGAGATGGAGGAAGAGGAAATTGACCAGAATTGTGATGATGAAACTAATTATGACTGGATCAGTGAAATTTCTAGGCCTAGGAGCTATTGGGAAGAGCGTAGGCAAGCATGGTATAGAGAGATGCTTGAAACTGGTTCTCAAAATGAGGATATAAAGAGGCTTCTTGAAAGGAGAACAGTGTCAAGTTTCCTTTCTAGTGACTTCAGGGATAAAATGGATAGATTGATGGTATCTCATAGGGGAACACAAGCACATTTAGTCAATAGTCAAGACCATGAGGAAAACAGCCAAGAATTGATGGCATTTTTACAAGAACGCTTGCATTCTGCAAGAACTTCTCAAGAGGGAAGAGATGGAACTGAGGAAGAAGAAGAAGAAGAAGAGGAGAAGAGAAGTCACACAGAGGAAGAGGAGGATAATGCAGATGAGCATGAAGAGGAGAATGAGCATGAGGAGGAGAGCTTGATAAGTGATTCATATCATGAAGCTGCTGATCGTTCCTCATCATGGAGTTACAGGGACAATGAAGCCGGTGATGATTTTGATAGAGTTGTTTCTACATCTCCACAACCTTATCAATCTCAACCTTTCTATCAGGATAGTAGGCAATCTCCATCCACCAATCATCATTCAATGGAAATGGAACTCATATATGATTTGAGAGGGCACATGGAGCAACTCTATCACGAGATGTCTGAGCTAAGGAAAACAATAAAGGGATGCATGAATATGCAGATGGAATTACAACAAAACATGAAACATGAGGTTCACTCAGTTAAAAAAGAAGAAAATAAGTGCCGTAACAGGACTCCAAAGAAAGGCAACTGCTGCATTTGCTATGAGGTGAAAGTTGACACGGTCTTGTACAGGTGTGGCCACATGTGTGCGTGTCTGAAGTGTGCCATAGAGTTGCAATGTAACAGTGGAAAATGTCCCATATGTCGGGCTAAAATAGTGGATGTTGTTCGAGTATATGTTGACGGTTAG 2754 0.4394 MAPSEVDVVSSSSFGCVLRDRNNREACRESNVKGTHNDHATLQRNIKNFVMDLNTCMGVSSVSTTNENENNSNTTTTTSSSSSSKNKGVNQRKALKNNRLERLRFTRANSFNNGSSSSNNKESSLALLISPRHSRLLDRWAARQAREMVSNLANEVELLSMDEGDMFPRTPSSSEEESISSEIPNMAASSLVQIWEKRLKQSVVSKTNTLAEKIGSTSSPTNEHVNASLPEEESFDGPSGNEESSFPEWESSDHSVSPQARSESGVSVASLIKKLTSTGQSQSSTPSFLDDNEHEGYASSSVTSSPCRERECGQQQQPPSEHKIVCPLRIRGRQAFNDLLMQMEKDRHRELNNLAERGAVSKFAQRGRIQALLRIKLLQRDLADSHRSHQKSTLCELNNRQAQGSAIMQLRERFTSGVELRTTVQAEVANPRSPQREEVNKTTQLGNSATTDQLRKDTRNQKAHGSDNLATKSTQKSVSHTRIDHNNTKEASPSSDVMVQETHPRSDAKALHNNSKETSEATTSMIDSSINEMTDRAEESSEKNGITKSSNDETVNEKDISNPQYAESSYKEKIEEAIDQNYAESSYGDEMEEEEIDQNCDDETNYDWISEISRPRSYWEERRQAWYREMLETGSQNEDIKRLLERRTVSSFLSSDFRDKMDRLMVSHRGTQAHLVNSQDHEENSQELMAFLQERLHSARTSQEGRDGTEEEEEEEEEKRSHTEEEEDNADEHEEENEHEEESLISDSYHEAADRSSSWSYRDNEAGDDFDRVVSTSPQPYQSQPFYQDSRQSPSTNHHSMEMELIYDLRGHMEQLYHEMSELRKTIKGCMNMQMELQQNMKHEVHSVKKEENKCRNRTPKKGNCCICYEVKVDTVLYRCGHMCACLKCAIELQCNSGKCPICRAKIVDVVRVYVDG* 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2530 917 PANTHER BNAC05G24000D PROTEIN 1 916 - -
Pvu9g2530 917 MobiDBLite consensus disorder prediction 276 321 - -
Pvu9g2530 917 MobiDBLite consensus disorder prediction 708 742 - -
Pvu9g2530 917 MobiDBLite consensus disorder prediction 211 228 - -
Pvu9g2530 917 MobiDBLite consensus disorder prediction 104 123 - -
Pvu9g2530 917 MobiDBLite consensus disorder prediction 424 565 - -
Pvu9g2530 917 MobiDBLite consensus disorder prediction 756 770 - -
Pvu9g2530 917 MobiDBLite consensus disorder prediction 211 264 - -
Pvu9g2530 917 Pfam Zinc finger, C3HC4 type (RING finger) 862 909 - -
Pvu9g2530 917 MobiDBLite consensus disorder prediction 547 565 - -
Pvu9g2530 917 MobiDBLite consensus disorder prediction 61 123 - -
Pvu9g2530 917 ProSiteProfiles Zinc finger RING-type profile. 865 904 IPR001841 -
Pvu9g2530 917 MobiDBLite consensus disorder prediction 239 264 - -
Pvu9g2530 917 MobiDBLite consensus disorder prediction 775 797 - -
Pvu9g2530 917 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 847 916 IPR013083 -
Pvu9g2530 917 CDD mRING-HC-C3HC5_NEU1 864 904 - -
Pvu9g2530 917 SUPERFAMILY RING/U-box 848 910 - -
Pvu9g2530 917 MobiDBLite consensus disorder prediction 698 797 - -
Pvu9g2530 917 Coils Coil 142 162 - -
Pvu9g2530 917 MobiDBLite consensus disorder prediction 61 93 - -
Pvu9g2530 917 MobiDBLite consensus disorder prediction 424 454 - -
Pvu9g2530 917 Coils Coil 706 743 - -
Pvu9g2530 917 PANTHER BNAC05G24000D PROTEIN 1 916 - -
Pvu9g2530 917 MobiDBLite consensus disorder prediction 532 546 - -
Pvu9g2530 917 MobiDBLite consensus disorder prediction 515 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2530 Pvu-Chr9 35806280 35811181 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2530 865 914 Miscellaneous Gene Families AT2G21380 40.000 2.14e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2530 - - vun:114162588 1243.8