Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2526 CTCAAAGGTGACATATATGCTTCTCATACAATTAGGATGCCTTCATCTATATCTTCTTTGGTGTCACTTCAGTTTGATGAGCAGTACTTTCTAGCAAGCTCAATGGATGGATCGATTAGGCTTTATGACCATCGTCTACTTCAGAGGGGTGCTGTTCAATGTTATGATGGGCATGTGAATTCTCATACTCGTATACAAATTGGTGTCGATCCAGCTGAGAGATTTGTTATGTCAGGTGGAGAGGATTGCAAGCTACGGTTATGGAGTCTCAAGTCTGGTGAATTGCTTTTTGAGGACAAGTTCTCTAATTCAATTATCTCCGCTATGTGCTATAAAACATACAGTAGTTGTAGAGCAGAAGAGGAAAACCAATACAAGTGTGACTTCTCTCAGGGTGCATGGCTTGGATCACACGAAGGACTGTTTTATATGCGTTGGTGA 441 0.4127 LKGDIYASHTIRMPSSISSLVSLQFDEQYFLASSMDGSIRLYDHRLLQRGAVQCYDGHVNSHTRIQIGVDPAERFVMSGGEDCKLRLWSLKSGELLFEDKFSNSIISAMCYKTYSSCRAEEENQYKCDFSQGAWLGSHEGLFYMRW* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2526 146 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 2 145 - -
Pvu9g2526 146 Gene3D - 6 131 IPR015943 GO:0005515
Pvu9g2526 146 SUPERFAMILY WD40 repeat-like 12 110 IPR036322 GO:0005515
Pvu9g2526 146 ProSiteProfiles Trp-Asp (WD) repeats profile. 55 98 IPR001680 GO:0005515
Pvu9g2526 146 Pfam WD domain, G-beta repeat 53 89 IPR001680 GO:0005515
Pvu9g2526 146 Pfam WD domain, G-beta repeat 21 43 IPR001680 GO:0005515
Pvu9g2526 146 PANTHER KATANIN P80 SUBUNIT 2 145 - -
Pvu9g2526 146 SMART WD40_4 48 89 IPR001680 GO:0005515
Pvu9g2526 146 SMART WD40_4 4 43 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2526 18 109 Miscellaneous Gene Families AT5G08390 29.787 1.71e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2526 K11799 - pvu:PHAVU_009G2443000 304.679