Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2421 ATGATCAAAGGTAAAGACGTGTATGATGTAGTGTCAGCTATTGTGCCCCTCTATGTGGCTTTGATCTTAGCCTATTGCTCCGTCCGTTGGTGGAAGATCTTCACACCAGAACAGTGTGCTGGTATAAACCGTTTTGTGTCGGTTTTTGCAGTGCCCTTCCTCTCCTTCCGTTTCATATCCAACAATAACCCTTACACCATGAACTTCAGGTTCTTAGCCGCGGACTCTCTTCAAAAGGTTGTGATTTTGGTTGCACTTGTTCTGTGGAACAGTTTGACAAAGTGGGGTAGCATTAACTGGACCATCACACTCTTCTCACTCTCCACTCTCCCCAACACACTCATCATGGGGGTTCCTCTTCTCAAAGCCATGTATGGAGACTTCACAGCCCCCCTCATGATCCAAATTGTGGTTTTCCAAAGTGTCATTTGGTTCACTCTCTTGCTCATCATGTATGAATATAGAGGGGCCAAGCTGCTCCTCTCAGAGCAATTCCCTGAGAAAGCTGGAGCCATTGCCTCCCTAAGGGTTGATTCAAATGTTGATTCTCTGAGTGACAGGAAGATACTAGAAACTAATGCAGAAACAGGAGAAGATGGGAATCTTCATGTGGTGGTGAGGAGCATGTCACGTTCTGTGTCCGTTGCATCAAGCTTCACTGGGATTGACATCTACTCGATGGAACCTCGTGGTTCCAAAAGAGAAAGGATGTTGAAAATGCATGAGAAAAGTTTTCCAAGAAGCAATAGTGTTGCTCATGATTTGGCTTGTGCATATCCGTCTCTAAAACCAATAGGGCAGTCACCAACTTCTGATGCTAATGTGAGACATGCAGCAAATAATAGAGCTGGGTATCATGAGCTTAAGACCATGGAATCTTCAAAGGGTGTTGATTTTGCAAAAGAAACTGCTGCATCAAAAGTTGCGCATGAAGATGATGAAAATGAAGGTATTAAAGATCCTGTATTAGGGAGTGAGATGAATGAGAGCATCGAAGAAGATTCAAATAGAATGCAAGAAATGCCTCGTGCTACTGTCATGATAAAACTTATTCTCACCATGGTTTGGAGGAATCTCATAAGAAACCCTAATACCTATGCAAGTGTTTCGGGTCTTGTTTGGTCTCTCATATTTTTTAGATGGAACATCACAACGCCACCTATAATAAAAGGATCCATAGAAATAATTTCTAATGCTGGGTTGGGAATGGCCATGTTCAGTTTAGGTTTATTCATGGGATTACAACCTAAAATCATTACTTGTGGAAAATCTCGAGCTATAATGTCAATGGTAATTAAGTTCTTGGTTGGTCCCTTAGTGATGTTTGCAACCTCTAAAGTCATGGATATCAATGGAGTTCTTTTAAGGGTTGCAATTCTTCAGGCATCTCTTCCCGAGGCTCTTGTTTGCTTTGTTTTTGCCAAAGAATATAATCTTCATGCAGACATACTCAGCACAGCGTAA 1464 0.4201 MIKGKDVYDVVSAIVPLYVALILAYCSVRWWKIFTPEQCAGINRFVSVFAVPFLSFRFISNNNPYTMNFRFLAADSLQKVVILVALVLWNSLTKWGSINWTITLFSLSTLPNTLIMGVPLLKAMYGDFTAPLMIQIVVFQSVIWFTLLLIMYEYRGAKLLLSEQFPEKAGAIASLRVDSNVDSLSDRKILETNAETGEDGNLHVVVRSMSRSVSVASSFTGIDIYSMEPRGSKRERMLKMHEKSFPRSNSVAHDLACAYPSLKPIGQSPTSDANVRHAANNRAGYHELKTMESSKGVDFAKETAASKVAHEDDENEGIKDPVLGSEMNESIEEDSNRMQEMPRATVMIKLILTMVWRNLIRNPNTYASVSGLVWSLIFFRWNITTPPIIKGSIEIISNAGLGMAMFSLGLFMGLQPKIITCGKSRAIMSMVIKFLVGPLVMFATSKVMDINGVLLRVAILQASLPEALVCFVFAKEYNLHADILSTA* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2421 487 Pfam Membrane transport protein 10 487 IPR004776 GO:0016021|GO:0055085
Pvu9g2421 487 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 1 233 IPR033526 GO:0010315|GO:0010329
Pvu9g2421 487 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 267 487 IPR033526 GO:0010315|GO:0010329
Pvu9g2421 487 TIGRFAM 2a69: auxin efflux carrier 1 487 IPR014024 -
Pvu9g2421 487 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 267 487 - -
Pvu9g2421 487 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2421 Pvu-Chr9 34533509 34536079 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2421 1 487 Organic Solute Cotransporters AT1G23080 42.424 4.72e-154 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2421 K13947 - gmx:100788935 577.4