Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2419 ATGATCAAAGGTAAAGACGTGTATGAAGTTGTGGCAGCGCTTGTGCCCCTCTACGTGGCTCTGTTCTTAGCATATGGCTCTGTCCGTTGGTGGAAGATCTTCACCCCAGAACAGTGTTCTGGTATAAACCGTTTTGTGTCGGTTTTTGCAGTGCCCTTTCTCTCCTTCCATTTCATATCCAACAACAACCCTTACACCATGAACTTCAGGTTCTTAGCCGCGGACTCTCTCCAAAAGGTTGTGATTTTGGTTGCCCTTGTTCTGTGGAACAGTTTGACAAAGTGGGGTAGCATCAACTGGACCATCACACTCTTCTCACTCTCCACTCTCCCCAACACCCTCATCATGGGGGTTCCTCTTCTCAAAGCCATGTATGGAGACTTCACAGCCACCCTCATGATCCAAATTGTGGTTTTCCAAAGTGTCATTTGGTACACTCTCTTGCTCTTCATGTTCGAATACAGAGGAGCCAAGCTGCTCATCTCAGAGCAATTCCCCGAGTCAGCTGGAGCCATTGCCACCCTAAGGGTTGATTCAAGTGTGAGCTCTCTAAACGGCACAGAGGCATTGCATGCTGATGCAGAAATTGGAGAAAAGGGAGAACTCCACGTGGTGGTGAGAAGCATGCCACGTTCTGTGCCTTCTTCATTCAACAAGTCATACTCAACACCTAGATCATCAAATGCAGGGTTTGAGAAAGGCATGGTGAAAAATGAAGAAGTTGATACAAATAAAAATCAACAAATGCCACGTGCTAAAGTCATGATAAATCTAATTCTCACCATGGTTTGGAGGAATCTCATAAGAAATCCTAATACTTATGCAAGTATTTTAGGTCTCATTTGGTCTCTCATATTTTTCAGGTGGAGCATCAAAATGCCATCCATTATAAAAGGTTCCATTGAAATAATTTCTAATACAGGATTAGGAATGGCCATGTTTAGTCTTGGTCTATTCATGGCATTACAACCTAAGATTATTACTTGTGGAAAAACCTTGGCTGCACTTGCATTCGCAATTAAGTTCTTGGTTGGTCCATTTATTATTCTTGCAACCTCCAAAATAATTGGTATCCATGGAGTTCTTTTACGAGTTACAATTGTTCAGGCTGTTCTTCCCCAAGGAATTGTCCCTTTTGTATTTGCAAGAGAATATAATCTCCACACAGACATACTCAGCACAGCGGTTATCTTCGGAATGGTGGTTGCGTTGCCTGTAACAATAATTTACTATGCAATTCTTGGACTTTAA 1251 0.4253 MIKGKDVYEVVAALVPLYVALFLAYGSVRWWKIFTPEQCSGINRFVSVFAVPFLSFHFISNNNPYTMNFRFLAADSLQKVVILVALVLWNSLTKWGSINWTITLFSLSTLPNTLIMGVPLLKAMYGDFTATLMIQIVVFQSVIWYTLLLFMFEYRGAKLLISEQFPESAGAIATLRVDSSVSSLNGTEALHADAEIGEKGELHVVVRSMPRSVPSSFNKSYSTPRSSNAGFEKGMVKNEEVDTNKNQQMPRAKVMINLILTMVWRNLIRNPNTYASILGLIWSLIFFRWSIKMPSIIKGSIEIISNTGLGMAMFSLGLFMALQPKIITCGKTLAALAFAIKFLVGPFIILATSKIIGIHGVLLRVTIVQAVLPQGIVPFVFAREYNLHTDILSTAVIFGMVVALPVTIIYYAILGL* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2419 416 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 1 226 IPR033526 GO:0010315|GO:0010329
Pvu9g2419 416 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 237 416 IPR033526 GO:0010315|GO:0010329
Pvu9g2419 416 TIGRFAM 2a69: auxin efflux carrier 1 416 IPR014024 -
Pvu9g2419 416 Pfam Membrane transport protein 10 411 IPR004776 GO:0016021|GO:0055085
Pvu9g2419 416 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 237 416 - -
Pvu9g2419 416 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2419 Pvu-Chr9 34519560 34523047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2419 1 416 Organic Solute Cotransporters AT5G15100 41.805 1.77e-103 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2419 K13947 - nnu:104605306 427.557