Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2416 ATGATGGCTCAGGCTATAGTGAACTTCATAGTGCAAAGTCTTGGTGATTTGCTCATTCAAGAAGCAGTGTTCCTTTATGGGGTTGAAGACCAAGTGTTGCTGCTGCAAACTGAATTGAGGCTGATGCGGTCTTACTTGCAAGATGCAGATAGAAGGCAAGATGAAAATGAAAGCCTAAGGAGTTGGATTTCAGAAATCAGAGAAGCTGCTTATGATTCTGATGATGTCATTGAGTCATACGCCTTCAGAGAGGCCTCAAGAAGAAATTTGCCAGGTCTGTCAAATCTCATCACAAGGTATGCTTCAATCATCAACCGATTTATAGAAATCCACATGGTGGGATCTCATGTTAAAAATGTCATAGCTAGGATTTCTAGTCTCACAAGGAGTCTTAAAACCTATGGCATACAACAAGGAGAGGCCTCAAATTCTATGTATGAGAGACAAACTTTGAGGAGGTCTTATTCACATGTCATTGAAGAGGACATCATTGGTGTTGACGATGATGTCAAGATTTTGGAGTCATGTTTGGTCGACCCCAGCAAAAGGTATAGAGTAATAGCCATTTGTGGGATGGGGGGATTGGGGAAGACAACATTGGCAAAGAAGGTTTACCATAGTGTTGATGTGAGGAACAAGTTTGATAGCTTGGCTTGGGCTTACATATCACAGCATTGCCAAGCAAGGGATGTTTGGATAGGAATTTTGTTTAGGCTGATCTCTCCTTCCCAAGAGCAAAGACAGGAAATTGAGAATATGAGAGACGAGGAGCTTGCAAGGATGCTTTACCAAGTTCAAGTGGAGAAATGTTGCTTAGTGGTCCTTGATGATATTTGGAATGCAGACACATGGAACAAACTGAAGCCGGCTTTCCCTCAAGGACTATCAGAAGTTGGTAGCAAAATATTGCTAACTTCTCGAAACATTGATGTTGCATTCCAGATGGATCCTAGTTGTTATCTTCACACACCAAAATGTTTGAATGAAGTTGATAGCTGGGAGTTGTTCCAAAAGAAGGCATTTCCAAAAATTGTTGATCCAGACTACAGAGAGAAGGAGAAGTTGGGAAGGGAAATGGTTGGAAGATGTGGAGGTTTACCATTGGCCATCATTGTTCTTGGAGGACTGCTAGCATCAAAGCCTACATTCTATGAATGGGACATTGTGTACAAGAACATCAACACATATTTGAGGAAAGCAAACGGCCAAGAACAACGCTTAGGAGAGGTGTTGGCATTGAGCTATTACGAATTACCATACCAGCTGAAGCCATGCTTCCTACACTTGGCTCATTTCCCTGAAAACTTAGAGATACCAACAAAGAAACTAATTAGAATATGGGTGGCAGAGGGTATTATATCTTTGGCTCACAATGAAGGAGAAGGTGAAGAAGCTCTTGAGGATGTGGCACAACGTTACTTGACTGAGCTAGTGGAGAGGTGCATGATTCAGGTAGTTGAAAAGAGTTCATCAGGGAGAATTAGAACTTGCCAAATGCACAACCTCATGAGGGAACTTTGTGTAGAGAAGGCATATCAGGAAAACTTTCTTTTGGAGATCAATTCCCGGAATGTAGATGAAACTAGAGGGACATCAAGAGCAAGGTCAGTGGGAAAAGTTCGCAGGATTGCCTTGTGTTTGGATCAAGATGTTGATAGGTTCTTCCCTTCACACCTGAAAAGCCACCACCATTTAAGGTCTCTTCTTTGCTTCCATGAAAAGACAGCTAGGCTAAAAGAATGGGGATTGATGAAGTCATTTTTCAAAAAATGTAGGTTACTCAGAGTCTTGAACTTGGAAGGCATACAGGGTCTGGGAGGGAAGTTGCCAAAAGAAATTGGCTACTTGATCCATCTAAGGTTTCTCAGTCTAAGAAATACAAAAATTGATGAGTTGCCCACATCAATAGGTAATTTAAAATGCTTGATGACCCTGGATCTTCTAACAGGGAATTCAACTGTGCAAATACCAAATGTCATAGGTAACATGCAAAAAATGAGACATTTATATCTACCAGAGTGTTGTGGTTATAGCATTGAAAGGTGGCAACTGGGCAACCTCAAAAACTTGCAGACCCTGATTAACTTCCCTGCAGAAAAGTGTCATGTAAAAGATCTCATGAAATTAACCAATTTGAGAAAATTAGTGATAGATGATCCTAACTTTGGAGGTATCTTTAGGTATCCTAATGTGCAATTCAGTCACCTAGAGTCATTGTTTTTTGTTAGTTATGAAGATACATCAATTGTCCATGTTGCATTAGGATGTCCCAATCTTTACAAACTGCACATAGAAGGGCCTATAAAGAATTTTCCTGAACCCCACCAACTTTCTTCCAAGCTTCAGAAGCTAAAGTTGATGGGTTCTGGACTTGTTGTAGATCCAATGCCAACATTAGAAAAGCTTCCCAATTTAAGGTTGCTTGAGCTGCAACCAGATTCATTCATAGGAAAGCAACTACATTGTTCCAGCCTAGGCTTTGCTCAGCTCAAGTCTCTGGTTATCCATGATTTGTCCAATCTTGAGGAGTGGAAGTTGGATAAAGGAGCCATGCCTTGTCTCAGAGAACTCAAGATTGAAAATTGCACCAAGCTTGAGGAGGTTCCAGATGGGCTCAGATTTCTTACCACTCTTCAGCATTTGGAGATCAAATCAATGTTTGCAGCATTCAGAACCAAACTTGAAAAAGGAGGAGAGGATCATTACAAAATCCAACATGTGCCAACTGTGGTTTTTTGTTATTGTGACTATTAG 2754 0.4085 MMAQAIVNFIVQSLGDLLIQEAVFLYGVEDQVLLLQTELRLMRSYLQDADRRQDENESLRSWISEIREAAYDSDDVIESYAFREASRRNLPGLSNLITRYASIINRFIEIHMVGSHVKNVIARISSLTRSLKTYGIQQGEASNSMYERQTLRRSYSHVIEEDIIGVDDDVKILESCLVDPSKRYRVIAICGMGGLGKTTLAKKVYHSVDVRNKFDSLAWAYISQHCQARDVWIGILFRLISPSQEQRQEIENMRDEELARMLYQVQVEKCCLVVLDDIWNADTWNKLKPAFPQGLSEVGSKILLTSRNIDVAFQMDPSCYLHTPKCLNEVDSWELFQKKAFPKIVDPDYREKEKLGREMVGRCGGLPLAIIVLGGLLASKPTFYEWDIVYKNINTYLRKANGQEQRLGEVLALSYYELPYQLKPCFLHLAHFPENLEIPTKKLIRIWVAEGIISLAHNEGEGEEALEDVAQRYLTELVERCMIQVVEKSSSGRIRTCQMHNLMRELCVEKAYQENFLLEINSRNVDETRGTSRARSVGKVRRIALCLDQDVDRFFPSHLKSHHHLRSLLCFHEKTARLKEWGLMKSFFKKCRLLRVLNLEGIQGLGGKLPKEIGYLIHLRFLSLRNTKIDELPTSIGNLKCLMTLDLLTGNSTVQIPNVIGNMQKMRHLYLPECCGYSIERWQLGNLKNLQTLINFPAEKCHVKDLMKLTNLRKLVIDDPNFGGIFRYPNVQFSHLESLFFVSYEDTSIVHVALGCPNLYKLHIEGPIKNFPEPHQLSSKLQKLKLMGSGLVVDPMPTLEKLPNLRLLELQPDSFIGKQLHCSSLGFAQLKSLVIHDLSNLEEWKLDKGAMPCLRELKIENCTKLEEVPDGLRFLTTLQHLEIKSMFAAFRTKLEKGGEDHYKIQHVPTVVFCYCDY* 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2416 917 PRINTS Disease resistance protein signature 186 201 - -
Pvu9g2416 917 PRINTS Disease resistance protein signature 265 279 - -
Pvu9g2416 917 PRINTS Disease resistance protein signature 363 377 - -
Pvu9g2416 917 PRINTS Disease resistance protein signature 800 816 - -
Pvu9g2416 917 Pfam NB-ARC domain 175 415 IPR002182 GO:0043531
Pvu9g2416 917 Gene3D - 6 114 - -
Pvu9g2416 917 Gene3D Ribonuclease Inhibitor 528 897 IPR032675 -
Pvu9g2416 917 Gene3D - 143 320 IPR027417 -
Pvu9g2416 917 PANTHER DISEASE RESISTANCE RPP8-LIKE PROTEIN 3-RELATED 4 888 - -
Pvu9g2416 917 Gene3D - 414 511 IPR036388 -
Pvu9g2416 917 Pfam Rx N-terminal domain 6 88 IPR041118 -
Pvu9g2416 917 PANTHER DISEASE RESISTANCE PROTEIN RP 4 888 IPR044974 GO:0006952
Pvu9g2416 917 SUPERFAMILY L domain-like 498 885 - -
Pvu9g2416 917 Gene3D - 326 413 IPR042197 -
Pvu9g2416 917 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 429 IPR027417 -
Pvu9g2416 917 CDD RX-CC_like 3 129 IPR038005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2416 Pvu-Chr9 34453815 34457698 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2416 605 815 Receptor kinase-like Gene Family AT3G47090 26.457 1.74e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2416 - - gmx:100305356 1481.08