Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2381 ATGGAGTGCGTTGCAGCGAGAAACTTGGCGGCAATGGCGTTTTGCCTGAGTCCTTCGTCGAGGTTGAGGTTGCGGAGGAAGAACCTGTGGAGAAGACGAACCGCCTCGGGCGGCCACGACGTTCGGTGGCGCTCGCGGTGGCTGAAGGCGGAGGCGAAGGCAGGGAGCGAGAGTTGCGTGGCGACCAAAGAAAACTTTGCGGATGACGAGGATTACGTGAAGGCCGGTGGCTCCGAACTCGTTTTCGTACACATGCAACAGAACAAAGCCATGGAAATGCAATCCAAGCTCGTGGATAAGTTGCCACCTATAGGAGATGATATACTGGATCTAGTTGTGATTGGTTGTGGTCCGGCTGGTCTTGCTCTGGCTGCTGAATCGGCCAAGTTGGGACTAAAAGTTGGGCTTATTGGTCCGGATCTTCCTTTTACCAATAATTATGGTGTGTGGGAGGACGAATTTAGAGATCTCGGACTTGAAGGTTGCATTGAACATGTTTGGAAGGATACCATTATCTATCTCGACAATAAGGACCCCGTTTTTATTGGACGTTCCTATGGACGTGTCAGTCGGCATCTGCTTCACGAGGAATTGTTACGCAGGTGTGTCGAGTCAGGTGTCTCGTATCTTAGCTCAAGAGTAGAAAGTATTATTGAGGCGAGCAATGGTCACAGTCGTATTGTCTGTGAATATGATATTGTAGTGCCCAGCAGGCTTGTTACTGTTGCATCAGGAGCTGCTTCGGGGAAACTGTTGCAATATGAGGTCGGGGGTCCAAAGGTTTCTGTTCAAACAGCTTACGGTGTGGAAGTTGAGGTGGAAAACAATCCTTATGATCCAAATCTGATGGTTTTCATGGATTACAGAGACTACATGGAGAAAAATGTTCAAGGTCTAGAAGCAAATTATCCAACATTTCTTTATGCAATGCCCATGTCCCGTACAAGAGTGTTTTTTGAGGAAACCTGTTTAGCGTCAAAAGACGCAATGCCTTTTGATTTACTAAAGAAGAAGCTCTTTTCGAGATTACATTCAATGGGGATCAGAATTACTAAAACTTACGAAGAG 1068 0.471 MECVAARNLAAMAFCLSPSSRLRLRRKNLWRRRTASGGHDVRWRSRWLKAEAKAGSESCVATKENFADDEDYVKAGGSELVFVHMQQNKAMEMQSKLVDKLPPIGDDILDLVVIGCGPAGLALAAESAKLGLKVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWKDTIIYLDNKDPVFIGRSYGRVSRHLLHEELLRRCVESGVSYLSSRVESIIEASNGHSRIVCEYDIVVPSRLVTVASGAASGKLLQYEVGGPKVSVQTAYGVEVEVENNPYDPNLMVFMDYRDYMEKNVQGLEANYPTFLYAMPMSRTRVFFEETCLASKDAMPFDLLKKKLFSRLHSMGIRITKTYEE 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2381 356 TIGRFAM carotene-cycl: lycopene cyclase family protein 110 356 IPR010108 GO:0016117|GO:0016705
Pvu9g2381 356 Gene3D - 109 296 IPR036188 -
Pvu9g2381 356 PRINTS Pyridine nucleotide disulphide reductase class-I signature 110 132 - -
Pvu9g2381 356 PRINTS Pyridine nucleotide disulphide reductase class-I signature 240 249 - -
Pvu9g2381 356 Pfam Lycopene cyclase protein 110 356 - -
Pvu9g2381 356 SUPERFAMILY FAD/NAD(P)-binding domain 109 297 IPR036188 -
Pvu9g2381 356 PANTHER LYCOPENE EPSILON CYCLASE, CHLOROPLASTIC ISOFORM X1 6 356 - -
Pvu9g2381 356 PANTHER - 6 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2381 Pvu-Chr9 33994307 34000139 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2381 K06444 - gmx:100788180 623.624