Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2374 ATGGGGGAAGAGGTGAGTGAAACCAATTTGCATGATGGAAACAGAGGAAACGAAGATCAAAACCTGGAATTTGACATCTATCCTTTGAGTAGTTACTATTTTGGATCCAAAGACGCCATTCCCTTCAAAGACCACACTCAACATCATCACCTTCTCAGGATTCAATCCAACTATGCTGCTCGTGGATTACGAACTTCTGTGGAGGCTGTCTTACTGGTTGAACTGTTCAAACATCCACACTTGCTGCTTTTGCAAGTAAGAAATTCCATCTATAAACTTCCTGGTGGTAGATTAAGGCCAGGGGAATCAGATACTGATGGATTGAAGCGGAAGCTGACAAGGAAGCTTTGTGTTGATGAAGATGGAGATGGTTCAGAATGGGAGGTGGGTGAATGCCTTGGAATGTGGTGGAGACCTGATTTTGAAACATTATTGTATCCTTTCTTGCCACCTAACATAAAACAGCCAAAGGAGTGTACAAAAGTCTTCCTTGTGAAGTTGCCTGCCAGTCAGAAGTTCATTGTACCCAAGAATATGAGGTTGCTTGCAGTCCCATTGTGCCAAGTTCATGAAAATCACAAGACATATGGGGAAATAATATCAGGGGTTCCACAGCTTCTATCAAAATTCTGTTTCAACATGATGGAATCTTGA 654 0.4205 MGEEVSETNLHDGNRGNEDQNLEFDIYPLSSYYFGSKDAIPFKDHTQHHHLLRIQSNYAARGLRTSVEAVLLVELFKHPHLLLLQVRNSIYKLPGGRLRPGESDTDGLKRKLTRKLCVDEDGDGSEWEVGECLGMWWRPDFETLLYPFLPPNIKQPKECTKVFLVKLPASQKFIVPKNMRLLAVPLCQVHENHKTYGEIISGVPQLLSKFCFNMMES* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2374 217 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 23 214 - -
Pvu9g2374 217 PANTHER PRE-MRNA CLEAVAGE FACTOR IM 25 KDA SUBUNIT 1 5 216 - -
Pvu9g2374 217 SUPERFAMILY Nudix 62 119 IPR015797 -
Pvu9g2374 217 PANTHER PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT 5 216 IPR016706 GO:0003729|GO:0005849|GO:0006378
Pvu9g2374 217 PIRSF CPSF-25 1 217 IPR016706 GO:0003729|GO:0005849|GO:0006378
Pvu9g2374 217 Pfam Nucleotide hydrolase 24 210 IPR016706 GO:0003729|GO:0005849|GO:0006378
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2374 Pvu-Chr9 33922325 33924732 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2374 K14397 - gmx:100791216 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2374 9 33922325 33924732 Pvu9g2374 9 33922325 33924732 ECH