Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2358 ATGGCGTCAGTGTACATACCGGTGCAGAATTCGGAGGAGGAGGTTAGGGTTGCTCTCGATCAGCTTCCGCGTGACGCCTCCGACATCCTCGACATCCTCAAGGCTGAACAAGCCCCTCTCGATCTCTGGCTCATCATTGCGAGGGAGTACTTCAAGCAGGGAAAAATTGATCAATTTCGCCAGATTTTGGAGGAAGGATCCAGTCCAGAAATTGATGACTACTATGCTGATGTTAGATATGAGAGGATTGCTATCTTAAATGCTCTTGGAGCTTACTATAGCTACCTTGGAAAAATAGAGACAAAACAACGAGAAAAGGAGGAGCATTTTATTTTGGCAACACAGTACTACAATAAAGCATCTAGGATTGACATGCATGAGCCCTCCACTTGGGTTGGGAAAGGTCAGCTTTTGCTAGCAAAGGGTGAAGTAGAACAGGCATCTGCTGCATTTAAGATTGTGTTAGATGGAGTCCGTGATAATGTTCCTGCTCTTTTGGGCCAGGCATGTGTTGAGTTCAACCGTGGACGATACTCGGATTCACTTGATTTGTATAAGAGAGCATTGCAAGTGTTTCCCAATTGCCCGGCAGCTGTGAGACTTGGCATAGGTCTATGTCGCTACAAATTAGGTCAATTTGAAAAGGCTCAGCAGGCATTTGAGCGAGTTTTACATCTAGATCCAGAAAATGTTGAGGCTCTAGTTGCCCTTGCAATAATGGACTTGCGCACTAATGAAGCTATTGGAATCAGAAAGGGAATGGTTAAAATGCAGAGGGCATTTGAGATATACCCATATTGTGCAATGGCTCTGAATTATCTTGCAAATCATTTCTTCTTCACTGGTCAACATTTTTTAGTTGAGCAACTGACTGAAACTGCATTGGCTGTTACCAATCATGGGCCAACAAAGTCTCACTCATACTATAATTTAGCACGCTCATATCATAGCAAGGGAGACTATGACAAAGCTGGGGTGTATTACATGGCATCTGTCAAGGAAGTCAACAAGCCCCATGAATTTGTATTTCCTTATTATGGTCTGGGACAAGTGCAGGTAAAGTTGGGAGATTTTAAAAGTGCACTCTCAAACTTTGAAAAGGTCCTGGAGGTATACCCGGATAATTGTGAGACATTGAAGGCACTTGCTCATATATATGTTCAGCTTGGTCAAACTGACAAAGGGCAGGACTTTATTAGGAGAGCTACCAAAATTGATCCCCGGGATGCCCAGGCATTTCTTGAGCTGGGAGAATTGTTAATTCTTTCCGACACAGGAGCTGCATTAGATGCATTCAAAACTGCTCGTACTCTTTTTAAGAAGGGAGGTCAAGAAGTACCAATTGAATTACTAAATAATGTTGGTGTGCTTCAGTTTGAAAGGGGTGAATTTGAGCTTGCTCAACAAACGTTTAAGGAGGCTCTTGGTGATGGTATTTGGCAATCTTTCATCAATGAGGAAAAAAAGTCTTCCGTAGATGCTGCTACTTCTACTCTTCAATTCAAGGACATGCAATTATTTCATGACTTTGAAAGCAATGGTCATCATGTAGAAGTGCCTTTGGATAAAGTCACTGTACTTTTTAACCTGGCTAGGTTACTTGAGCAGTTAAATGAATCTGGAACTGCCAGCATTTTGTATCGCCTTATCTTGTTCAAGTACCCAGACTATATTGATGCGTATTTGAGGCTAGCTGCAATTGCAAAAGATCGGAACAACATTCTTTTAAGCATTGAACTGGTTAATGATGCCTTGAAGGTGAATGACAAGTGTCCCAATGCATTATCTATGCTTGGTGAGTTGGAGTTGAAAAATGATGATTGGGTAAAGGCAAAAGAAACACTCCGAGCAGCAAGTGATGCAACCGAAGGCAAGGACTCATATGCTACTCTCTCTCTGGGAAACTGGAACTACTTTGCAGCAGTTCGCAATGAAAAGAGAAATCCCAAGCTAGAGGCTACTCATTTGGAAAAGGCCAAAGAACTTTATACTAGAGTTCTGATTCAGCATTCTTCTAATTTATATGCTGCCAATGGTGCTGCGGTAGTGTTAGCAGAGAAAGGCCATTTTGATGTGTCAAAGGATATCTTTACACAGGTTCAAGAAGCTGCCAGTGGTAGTGTTTTTGTCCAGATGCCTGATGTTTGGATAAATCTGGCCCATGTTTATTTTGCTCAGGGAAATTTTGCTTTGGCAGTGAAAATGTACCAAAACTGCTTGCGGAAGTTTTATCATAACACAGACTCTCAAATACTTCTATATTTAGCTCGTACCCATTATGAGGCTGAACAGTGGCAAGACTGTATAAAAACTCTACTGAGAGCCATCCATTTGGCACCCTCAAACTATACTTTAAGGTTTGATGCTGGGGTTGCAATGCAAAAGTTTTCAGCATCAACATTGCAAAAAGCAAAGAGGACTGCGGATGAGGTGAGAGCAACTGTTGCTGAGCTGCAAAATGCTGTTCGTGTATTTAGTCAGTTGTCTGCTGCTTCCAACCTACACATTCATGGGTTTGATGAGAAGAAAATTGACACTCATGTTGGATACTGCACCCACTTACTTACGGCTGCTAAAGTTCATCTTGAAGCTGCTGAGCGTGAAGAGCAGCAGGTACGGCAGAGACAAGAACTTGCTCGTCAGGTTGCACTTGCAGAGGAAGCCCGACGAAAGGCTGAAGAGCAAAGGAAGTTTCAGATGGAAAGGAGAAAACAAGAGGATGAACTAAAGCGAGTGCAACAACAGGAAGAACATTTTAAGCGTGTTAAGGAGCAATGGAAGAGCAACAGTCATTCAAAACGGAGAGAAAGATCAGATGATGAAGAGGGAGGGACCGGTGAGAAGAAGAAAAGAAAAAGTGGAAAGAAGAGAAAGAAGGATAAGCACTCAAAATCACGGTATGACACGGAGGAACCGGAAGCTGATATGATGGATGAACAAGAAATGGAGGACGAAGAAGGTGACGTCTACAGAGAGGAACCTCAGACTCATGGGGAGGAAAATGCTCATGGTCTTCTTGCTGCAGCGGGGCTTGAAGATTCCGATGCAGATGAGGAGATGGGTGCACCATCCTCAAGCATAGCCCGGCGAAGGCAAGCATTATCGGAATCTGAAGATGATGAACCATTGCGAAGGCAGTCAAGTCCTGTAAGAGAAAATTCTGGTGAGATGCAGGAGAGTGATGGAGAAATCAGGGATCTGGATAAGACAAATGGAGATGATGGCACTGATGAGGACAAACATTATTGA 3249 0.43 MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFRQILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGVRDNVPALLGQACVEFNRGRYSDSLDLYKRALQVFPNCPAAVRLGIGLCRYKLGQFEKAQQAFERVLHLDPENVEALVALAIMDLRTNEAIGIRKGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQVKLGDFKSALSNFEKVLEVYPDNCETLKALAHIYVQLGQTDKGQDFIRRATKIDPRDAQAFLELGELLILSDTGAALDAFKTARTLFKKGGQEVPIELLNNVGVLQFERGEFELAQQTFKEALGDGIWQSFINEEKKSSVDAATSTLQFKDMQLFHDFESNGHHVEVPLDKVTVLFNLARLLEQLNESGTASILYRLILFKYPDYIDAYLRLAAIAKDRNNILLSIELVNDALKVNDKCPNALSMLGELELKNDDWVKAKETLRAASDATEGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKAKELYTRVLIQHSSNLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHGFDEKKIDTHVGYCTHLLTAAKVHLEAAEREEQQVRQRQELARQVALAEEARRKAEEQRKFQMERRKQEDELKRVQQQEEHFKRVKEQWKSNSHSKRRERSDDEEGGTGEKKKRKSGKKRKKDKHSKSRYDTEEPEADMMDEQEMEDEEGDVYREEPQTHGEENAHGLLAAAGLEDSDADEEMGAPSSSIARRRQALSESEDDEPLRRQSSPVRENSGEMQESDGEIRDLDKTNGDDGTDEDKHY* 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2358 1082 Coils Coil 801 821 - -
Pvu9g2358 1082 ProSiteProfiles TPR repeat profile. 342 375 IPR019734 GO:0005515
Pvu9g2358 1082 Gene3D Tetratricopeptide repeat domain 650 835 IPR011990 GO:0005515
Pvu9g2358 1082 ProSiteProfiles TPR repeat region circular profile. 342 375 - -
Pvu9g2358 1082 Coils Coil 855 922 - -
Pvu9g2358 1082 Gene3D Tetratricopeptide repeat domain 515 649 IPR011990 GO:0005515
Pvu9g2358 1082 MobiDBLite consensus disorder prediction 972 989 - -
Pvu9g2358 1082 MobiDBLite consensus disorder prediction 1032 1047 - -
Pvu9g2358 1082 ProSiteProfiles TPR repeat profile. 376 409 IPR019734 GO:0005515
Pvu9g2358 1082 Gene3D Tetratricopeptide repeat domain 337 479 IPR011990 GO:0005515
Pvu9g2358 1082 Gene3D Tetratricopeptide repeat domain 8 336 IPR011990 GO:0005515
Pvu9g2358 1082 PANTHER RNA POLYMERASE-ASSOCIATED PROTEIN CTR9 1 1056 IPR031101 GO:0006355|GO:0016570
Pvu9g2358 1082 ProSiteProfiles TPR repeat profile. 197 230 IPR019734 GO:0005515
Pvu9g2358 1082 SUPERFAMILY TPR-like 654 802 IPR011990 GO:0005515
Pvu9g2358 1082 SUPERFAMILY TPR-like 115 243 IPR011990 GO:0005515
Pvu9g2358 1082 MobiDBLite consensus disorder prediction 1056 1082 - -
Pvu9g2358 1082 Pfam Tetratricopeptide repeat 306 333 IPR019734 GO:0005515
Pvu9g2358 1082 ProSiteProfiles TPR repeat region circular profile. 197 230 - -
Pvu9g2358 1082 Pfam Tetratricopeptide repeat 718 781 - -
Pvu9g2358 1082 SUPERFAMILY HCP-like 203 435 - -
Pvu9g2358 1082 SMART tpr_5 448 483 IPR019734 GO:0005515
Pvu9g2358 1082 SMART tpr_5 128 161 IPR019734 GO:0005515
Pvu9g2358 1082 SMART tpr_5 713 746 IPR019734 GO:0005515
Pvu9g2358 1082 SMART tpr_5 376 409 IPR019734 GO:0005515
Pvu9g2358 1082 SMART tpr_5 342 375 IPR019734 GO:0005515
Pvu9g2358 1082 SMART tpr_5 162 195 IPR019734 GO:0005515
Pvu9g2358 1082 SMART tpr_5 197 230 IPR019734 GO:0005515
Pvu9g2358 1082 SMART tpr_5 592 625 IPR019734 GO:0005515
Pvu9g2358 1082 SMART tpr_5 558 591 IPR019734 GO:0005515
Pvu9g2358 1082 SMART tpr_5 524 557 IPR019734 GO:0005515
Pvu9g2358 1082 SMART tpr_5 305 338 IPR019734 GO:0005515
Pvu9g2358 1082 SMART tpr_5 749 782 IPR019734 GO:0005515
Pvu9g2358 1082 ProSiteProfiles TPR repeat profile. 713 746 IPR019734 GO:0005515
Pvu9g2358 1082 MobiDBLite consensus disorder prediction 895 949 - -
Pvu9g2358 1082 MobiDBLite consensus disorder prediction 895 1082 - -
Pvu9g2358 1082 SUPERFAMILY TPR-like 449 703 IPR011990 GO:0005515
Pvu9g2358 1082 Pfam Tetratricopeptide repeat 175 236 - -
Pvu9g2358 1082 Pfam Tetratricopeptide repeat 355 412 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2358 K15176 - gmx:100794371 1942.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2358 9 33702500 33715146 Pvu9g2358 9 33702500 33715146 ECH