Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2350 ATGGTGGCCATGGCGAGCACCGCCAATAGAAGAATCGAAACATACGAAGAGTTCGCGAAAGTTCACGCGCTGCTACTTGCTGCGTCGGGGTTGCCGGAGTGCCTGCACCGGCGCCTATTCGATAAGCTCTCCGGCGAGTCCTTCGACGGCGGCAGCCACTTTCAGATCCAGCCATGCGAGGGCGGCCGTCAGCGGCGCCTTGTTCTCACGTCGACGTCTATGGAAACGGACTCCGACGTCTTCCTCGTGGATCATGCGTGGACTTTCAGACTCTCCGACGCATACAAGCAGCTGCGTGAGGTTCCAGGATTGGCTGAGAGGATGGGCTCTCTGATGTGTGTGGATGTTGATGTTGATGATGATGAAGATGAAGGGAACTGTAAGCTTGGTGTTGAGGAAACTTTGGAGAGTGAAGTTGGCGAGGCAAAGGAGAAAGGAGATGGGACGTTACGGTGGTTGGAGCTTGAAGGGCTTAACATCGATGATGCTATGCTTGTGTCTCTAGCCTTACCAACTAGGTTTCCGGATTTAGTGGCACTTAGCCTGCTTGGAAACAAGCTCAATAGCGCCGAAGTGGTTGTTCAGGAAGTAATCAAATTTAAGCATCTCAAAGGAATATGGCTCAACAGTAACCCACTTCTTAAAAATTGTGATGGCAAGCTTGAAGGGGTGATTCTTAAGGAGTTGCCAGAACTGGAAATTTATAATTCAAGTTTCACAAGCAATTTTGGGGAGTGGGCGTTGGGCTTTTGTGCAGGGATATATGGAAAGGATAACCCTGTAAATGCTGATCAGGCTCACACTTCACTGCACACTGTGTCTTCTCTTGACCTTTCAAATAGGAACATTCACAATTTAAAGAATAAGGCATTTACACCCATTTGTTTGCCATCTCTTACGTACTTGAACATTCAAGGAAATCCATTGGACCAAAACTCAGTTAGTGACTTGTTAGATCTGCTGCGTAGATTCACTTGCTTGCGTTCATTGGAGGTTGATATTCCAGGTCCACTTGGACGAAGGGCCATTGATATTCTGGAATCTCTTCCAAACATTTCTGAGCTAAATGGTATCAATGCATCCAAAATATTGGAAACAGGAAAGCATGTGATTGGTTCAATGCTTCTTCCTCGTCTTCCTGAATGGACTCCTGATGAGCCTCTTGCTGATCGTATTATAAATGCAATGTGGCAATATCTAATGACATATAGACTTGCAGATGAAGAAAAGTTAGATGAAACATCAGTATGGTATGTGATGGATGAGCTAGGTTCAGCTTTGCGGCATAGTGATGAGCCAAATTTCAGAGTGGCACCATTTCTGTTCATGCCAGAGGGCAATCTAGCATCAGCTGTGAGCTTTTCTATTCTATGGCCAACACAGAATGTTCAAAAAGGTGATGAGTGCACACGCAATTTTCTTCTCGGTATAGGGGAAGATAAACAACGTTCTGCCAGGCTTACTGCCTGGTTCCACACTCCAGAAAACTACTTTATCAATGCATACGAGAAGCACCATCAGAAATTGTTGTCCACAAGTTTAATATCTCCCACCTTTCAGTATTCTGAGACTGGAAGTATTCATCAACATTGTGGGCGTCCATTACGTGTTTACACAGATATACCTCACGTAGAGGAATACTTAACACATCCCGAGTTCGCAATCACAAATGAACCAAAAGGTGCAGACATAATATGGACAGGTATGCAAGTAGATGAGGAGATGAAGAAAGCTACTGGAATTACGGATCAGCAATACATTAATCAATTTCCTTTTGAAGCATGTCTTGTTATGAAGCATCATTTAGCAGAGACAATTCAAAAGGCACATGGATCTCCTCAATGGTTGCAGCCTACTTATAATCTGGAAACACACCTATCTCAACTTATTGGTGACTATTGTGTCCGCAGAAAGGAAGGACTAGACAATCTTTGGATCTTAAAACCCTGGAATATGGCCCGAACCATTGATACTACTGTAACTGATAATTTGCCTGCAATAATCCGGCTCATGGAAACTGGTCCCAAAATTTGCCAGAAGTATATTGAACAGCCTGCATTGTTCCAGGGAAAAAAGTTTGATCTCCGTTACATAGTACTGGTTCGGAGCATGCATCCTCTGGAGATATTCCTGTCAGATTGTTTCTGGGTTAGGATAGCCAACAACCTATATTCTTTGGCCAGAAGTAGTTTGTTTGAGTACGAAACTCATTTCACTGTTATGAATTATCGCGGAGCCATAAATCATAAGAATGCTAGCGAATTTGTGAGGGAATTTGAGGAAGAACATCAAGTTAAATGGTTGGATATACACACAAGAGTAAGGAAAATGATTCGTTCAGTATTTGAGGCAGCTGCTGTTGCTCATCCTGAGATGCACAGTCCAACATCAAGGGCAATGTATGGTGTAGATGTCATGTTGGACAGCTCTTTCCAACCCAAGTTACTAGAGGTAACTTACTGCCCGGATTGTACAAGAGCTTGCAAATATGACATGGATATTGTGGTTGGAGAGGGAGGTGTTGCCAAAGGTGTTGATTTCTTCAACAATGTGTTCAGGTGTCTCTTTTTGAATGAAACTTCACAAGTTAGTCAATTGTAA 2601 0.436 MVAMASTANRRIETYEEFAKVHALLLAASGLPECLHRRLFDKLSGESFDGGSHFQIQPCEGGRQRRLVLTSTSMETDSDVFLVDHAWTFRLSDAYKQLREVPGLAERMGSLMCVDVDVDDDEDEGNCKLGVEETLESEVGEAKEKGDGTLRWLELEGLNIDDAMLVSLALPTRFPDLVALSLLGNKLNSAEVVVQEVIKFKHLKGIWLNSNPLLKNCDGKLEGVILKELPELEIYNSSFTSNFGEWALGFCAGIYGKDNPVNADQAHTSLHTVSSLDLSNRNIHNLKNKAFTPICLPSLTYLNIQGNPLDQNSVSDLLDLLRRFTCLRSLEVDIPGPLGRRAIDILESLPNISELNGINASKILETGKHVIGSMLLPRLPEWTPDEPLADRIINAMWQYLMTYRLADEEKLDETSVWYVMDELGSALRHSDEPNFRVAPFLFMPEGNLASAVSFSILWPTQNVQKGDECTRNFLLGIGEDKQRSARLTAWFHTPENYFINAYEKHHQKLLSTSLISPTFQYSETGSIHQHCGRPLRVYTDIPHVEEYLTHPEFAITNEPKGADIIWTGMQVDEEMKKATGITDQQYINQFPFEACLVMKHHLAETIQKAHGSPQWLQPTYNLETHLSQLIGDYCVRRKEGLDNLWILKPWNMARTIDTTVTDNLPAIIRLMETGPKICQKYIEQPALFQGKKFDLRYIVLVRSMHPLEIFLSDCFWVRIANNLYSLARSSLFEYETHFTVMNYRGAINHKNASEFVREFEEEHQVKWLDIHTRVRKMIRSVFEAAAVAHPEMHSPTSRAMYGVDVMLDSSFQPKLLEVTYCPDCTRACKYDMDIVVGEGGVAKGVDFFNNVFRCLFLNETSQVSQL* 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2350 866 Gene3D Ribonuclease Inhibitor 121 242 IPR032675 -
Pvu9g2350 866 Gene3D - 660 843 - -
Pvu9g2350 866 Coils Coil 863 866 - -
Pvu9g2350 866 PANTHER TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12 9 865 IPR027749 -
Pvu9g2350 866 SUPERFAMILY RNI-like 150 356 - -
Pvu9g2350 866 Gene3D Ribonuclease Inhibitor 255 362 IPR032675 -
Pvu9g2350 866 ProSiteProfiles TTL domain profile. 530 858 IPR004344 GO:0036211
Pvu9g2350 866 Pfam Tubulin-tyrosine ligase family 584 834 IPR004344 GO:0036211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2350 K16609 - gmx:100809212 1557.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2350 9 33615907 33621723 Pvu9g2350 9 33615907 33621723 ECH