Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2343 ATGGGTTCTGAAAACAATAGCTTCGACTTTTTGAAGGAGATTGGCTTGGGTTCCTCCAATATTGGCTCTTATGTTAATGGCCAATGGAAAGCCACTGGTTCTTCTGTCACTTCTGTTAATCCTTCTAACAATCAGACCATAGCTGAAGTCACTGAAGCTACTTTGCAAGATTATGAAGAGGGCTTGCAAGCCTGCAGTGAAGCAGCCAAGACATGGATGACTATTCCGGCACCAAAGAGAGGTGAGATTGTGAGACAGATTGGTGAAGCTTTGAGGGCCAAGTTGGATCCTCTGGGTAGGCTGGTGGCTCTTGAGATGGGAAAAATTCTTCCAGAAGGAATTGGGGAAGTTCAGGAAATTATTGATATGTGTGATTACGCCGTTGGGTTAAGCCGACAATTGAGTGGATCAATTATACCATCAGAACGTCCAGATCACATGATGTTTGAGGTATGGAACCCCCTTGGAATAGTTGGTGTAATCACCGCTTTCAACTTTCCATGCGCAGTTCTAGGATGGAATGCTTGCATTGCATTGGTCTGTGGCAACTGTGTTGTATGGAAGGGCGCTCCAACAACTCCTCTGATAACTATTGCTGTGACAAAGCTAGTAGCTGAAGTTCTTGAGAAGAACAACTTACCCGGTGCAATATTCACCTCTTTCTGTGGAGGTGCTGACATTGGTCAGGCAATAGCAAAAGATACACGCATTCCCCTGGTTTCATTCACTGGAAGTACAAAGGTGGGTTTGATGGTGCAGCAAACAGTGAATGACAGATTTGGCAAGTGCTTGCTTGAGTTAAGTGGAAACAATGCAATAATAGTCATGGATGATGCAGACATTAAACTGGCTGTACGCTCTATTTTGTTTGCTGCTGTGGGTACTGCTGGTCAGCGTTGTACAACCTGCCGCAGACTGTTTTTGCACGAGAGTATTTACGCAAATGTACTAGACCAACTTGTTGGACTCTACAAACAAGTCAAGATTGGGAACCCCTTGGAGAAGGGGACTCTAGTTGGGCCATTGCATACTCGTACTTCCGTGGAAAACTTTCAGAAGGGTATTTCAGTCATAAAATCCCAGGGAGGGAAGATCTTAACAGGTGGATCCGTGTTAGAGTCAGAAGGAAATTTTGTACAACCAACGATTGTTGAGATATCTTCAGATGCTCCTGTAGTTAAAGAAGAATTGTTTGGTCCAGTTCTTTATGTCATGAAATTTCAGACTCTGGAAGAAGCAATTGCCTTGAACACTGAGTCCTCAAGGATTAAGTAG 1275 0.4392 MGSENNSFDFLKEIGLGSSNIGSYVNGQWKATGSSVTSVNPSNNQTIAEVTEATLQDYEEGLQACSEAAKTWMTIPAPKRGEIVRQIGEALRAKLDPLGRLVALEMGKILPEGIGEVQEIIDMCDYAVGLSRQLSGSIIPSERPDHMMFEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAVTKLVAEVLEKNNLPGAIFTSFCGGADIGQAIAKDTRIPLVSFTGSTKVGLMVQQTVNDRFGKCLLELSGNNAIIVMDDADIKLAVRSILFAAVGTAGQRCTTCRRLFLHESIYANVLDQLVGLYKQVKIGNPLEKGTLVGPLHTRTSVENFQKGISVIKSQGGKILTGGSVLESEGNFVQPTIVEISSDAPVVKEELFGPVLYVMKFQTLEEAIALNTESSRIK* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2343 424 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 20 419 IPR044638 GO:0004029
Pvu9g2343 424 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 269 420 IPR016163 GO:0016620
Pvu9g2343 424 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 36 268 IPR016162 GO:0016491
Pvu9g2343 424 Pfam Aldehyde dehydrogenase family 33 417 IPR015590 GO:0016491
Pvu9g2343 424 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 265 272 IPR029510 GO:0016491
Pvu9g2343 424 SUPERFAMILY ALDH-like 20 419 IPR016161 GO:0016491
Pvu9g2343 424 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 20 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2343 Pvu-Chr9 33506902 33512327 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2343 1 418 Acyl Lipid Metabolism Gene Families AT1G54100 78.469 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2343 K14085 - gmx:100811186 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2343 9 33506902 33512327 Pvu9g2343 9 33506902 33512327 ECH