Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2336 GCTAAGTACAATAATATGCAAAAAAATATAGAGATATTTGGGGAAGACCCTAAAAATTGTTCTCTTGTATTTGATAGACCAACTCGTATTGAGATTATGAATGAGCAATCAGAAATGCCAATGGCGGTTTATGTGTCTCGTGAAAGAAGGCCAACTATTCCTCATAGATACAAAGGAGGAGCCCTCAATACATTGCTGAGAGTCTCAGGGCTATTGAGCAATGGCCCTTATGTGCTTGTTGTTGACTGTGATATGTATTGCAATGATCCATCCTCAGCAAAACAAGCCATGTGTTTTTTTCTTGATCCTGAAACCTCCAAAGATGTTGCTTTTGTCCAATTTCCTCAAATGTTTCACAACCTTAGCAAGAAAGACATCTATGATAGTCAAGCTAGGCGTGCTTTTAAGACATTGTGGCAAGGAATGGATGGACTAAGAGGGCCAGGTCTTGCTGGTAGTGGTTGTTACATTAGTAGAGCTGCACTTCACCTTCAAAGCCCTAATCAAAATGTTACAGATGTCTTTGAACATAATGCCCAAAACAACTTTGGCAAGTCTACCATGTACATTGAATCGTTAAAGGCCATCATCTATGGGCACCAAAATGCCAAAAAGCATATTCCTAGAGATGTAATTTTGGAAGAAGCTCAAGTAGTGGCCTCTTGTTCCTATGAAAAAGATACAAATTGGGGTAAAGAGGTAGGATTCTCATATGCTATATTACTGGAGAGTACAGTTACAGGGTATCTTCTCCACTGCAGAGGGTGGAGATCAACTTACCTTTACCCCAAAAGAGCATGTTTCTTGGGATGTGCAGTGATTGACTTTAAAGAGGGTATGGCTCAGCAAGTGAAATGGGTCTCTGAACTTTCCCTGCTAGGAATATCCAAATATAGCCCTTTCACTTATGGGATTTCAAGAATGCCCATTATTCATAGCTTTACCTTTTGCTACTTTACATCCACAACTCAATATGTTCTTGCCTTACTCATATATGGCCTCATTCCCCAACTATGCTTCTTCAAAGGAATTCCTCTCTTTCCAATGGTTACAGAAGCATGGTTTGGAGTTTTTGCAATATTATTCATATCCAGTCAAAGTCAACATTTGATTGAGATTCTTTGTGGTGGTGGGCCTTTGAGATCATGGTGGGATGAACAAAGAATTTGGATCATGAGGTCACTTGTTGGAAACATATTTGCCTTTGTGGTAGCAATGAAGAAAGTTTTTGGGTTGAACAAAGCAAAATTGACTTTATCAAACAAAGTTATTGAGAAAGAAAGTTTGAAGAAATATGAGGAGGGTAAGTTCAATTTCCAAGGTGCAGGTTTGTTCATGGTTCCATTGAGTATATTACTCGTGATAAACATTGTTTGCTTCTTTGGTGGCTTATGGAGATTGGTCCATGTCAAAGATTTTGAAAAGATGTTTGCTCAACTTTTTCTGCTTAGCTATTTGCTGGCTCTGGGTTATCCCATTGTGAAGGGGATTATAAGTTTGAAGAGCAAATGTGGCTAG 1518 0.3893 AKYNNMQKNIEIFGEDPKNCSLVFDRPTRIEIMNEQSEMPMAVYVSRERRPTIPHRYKGGALNTLLRVSGLLSNGPYVLVVDCDMYCNDPSSAKQAMCFFLDPETSKDVAFVQFPQMFHNLSKKDIYDSQARRAFKTLWQGMDGLRGPGLAGSGCYISRAALHLQSPNQNVTDVFEHNAQNNFGKSTMYIESLKAIIYGHQNAKKHIPRDVILEEAQVVASCSYEKDTNWGKEVGFSYAILLESTVTGYLLHCRGWRSTYLYPKRACFLGCAVIDFKEGMAQQVKWVSELSLLGISKYSPFTYGISRMPIIHSFTFCYFTSTTQYVLALLIYGLIPQLCFFKGIPLFPMVTEAWFGVFAILFISSQSQHLIEILCGGGPLRSWWDEQRIWIMRSLVGNIFAFVVAMKKVFGLNKAKLTLSNKVIEKESLKKYEEGKFNFQGAGLFMVPLSILLVINIVCFFGGLWRLVHVKDFEKMFAQLFLLSYLLALGYPIVKGIISLKSKCG* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2336 505 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 1 503 - -
Pvu9g2336 505 SUPERFAMILY Nucleotide-diphospho-sugar transferases 46 344 IPR029044 -
Pvu9g2336 505 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 503 - -
Pvu9g2336 505 Pfam Cellulose synthase 175 503 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pvu9g2336 505 Pfam Cellulose synthase 35 169 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pvu9g2336 505 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 15 170 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2336 Pvu-Chr9 33453630 33457526 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2336 25 498 Glycosyltransferase AT4G24000 34.172 4.35e-104 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2336 - - pvu:PHAVU_009G2260000 1020.38