Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2335 ATGGCAACCCTGCACACACACACCGTTCAGCCATGGTTTTCTCTCACCAGACTTCACATACTCTTCCACTCACTCGCACTCTTCTCTCTCTTTTACTACCGCACAACTCATCTTCTGCACCAGCCAACGCTCCCATGGTTTCTCATGACGCTGGCTGAGGCCATCCTCGCCGAGCTCTGGCTCTACAACCAGGCCTTCCGGTGGCGCCCGGTCACGCGCTCTGTCGCCACGGAGAAGCTTCCCGGCGAGGAGAAGCTGCCGGCGGTGGATATCTTCGTCTGCACGCTTGATCCTGAGAAGGAGCCCACCGTGCAGGTGATGGACACTGTTATCTCCGCCATGGCCATGGATTACCCCTCCGGCACACTGGCGGTGTATCTCTCCGACGACGGTGGGTGTCCCGTGACTCTGTACGGGATGAGAGAGGCTGTGGAGTTCGCGAAAGAGTGGGTCCCTTTCTGCAGAAAGTATGGTGTGAAGTTGAGGTGTCCGAAGGTGTTCTTCTCTCCCATGGGAGAAGATGAAGAGCTCCTCCGCACTGAGGGATTCATGGCAGAGAAAGAACAGCTGAAG 573 0.5707 MATLHTHTVQPWFSLTRLHILFHSLALFSLFYYRTTHLLHQPTLPWFLMTLAEAILAELWLYNQAFRWRPVTRSVATEKLPGEEKLPAVDIFVCTLDPEKEPTVQVMDTVISAMAMDYPSGTLAVYLSDDGGCPVTLYGMREAVEFAKEWVPFCRKYGVKLRCPKVFFSPMGEDEELLRTEGFMAEKEQLK 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2335 191 Pfam Cellulose synthase 89 171 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pvu9g2335 191 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 7 191 - -
Pvu9g2335 191 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 77 167 IPR029044 -
Pvu9g2335 191 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 7 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2335 Pvu-Chr9 33450765 33451375 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2335 17 169 Glycosyltransferase AT4G24010 39.355 2.99e-36 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2335 - - pvu:PHAVU_009G2260001 398.282