Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2325 AACTGGGGTAGCAAAGATCCACATAGAACTGCTGAAGATGTTGCCTATTCTGTGGCTAGGTTTTTTCAATCAGGTGGCACATTCCAAAACTACTATATGTATCACGGTGGAACTAACTTTGGCCGAACAGCTGGTGGTCCATACATTACTACCACATATGATTACGATGCTCCTCTTGATGAATTTGGAAACATAGCCCAACCAAAATGGGGTCACCTCAAAGAACTTCACAGGGTTCTGAAATCAATGGAGAATAGTCTAACTAATTATGGAAACGTATCTGAAGTTGATTTGGGCCACTCTGTTAAGGCTACTGTGTATGCCACAAATGATTCATCAAGCTGCTTCTTGACCAACACCAACACCACCACTGATGCTACAGTCACATTCAGAGGAAACAAATATAATATTCCTGCCTGGTCTGTTAGTCTTCTTCCTGATTGTCAAACTGAAGAGTATAACACAGCCAAGGTGAATGTTCAAACCTCCCTCATGGTAAAGGGTAGAAACAAAGCAGAAGATGAGCCAACGGCTTTGAATTGGGTGTGGAGAGCTGAGAATATTGATGATGCTCTTCTTGGCAAAGGAAATTTCTCCGAAAAAAGACTTATTGATCAAAAAACAGTTGCTTCTGATACTAGTGATTATCTTTGGTACATGACAAGACTTGATATTGATCAAAATGATCCAATTTTGTCGGATAATATGTCTCTTAGCATCAATGGCAGTGGCCAAGTAATTCATGCATTCGTTAATGGAGAACATATTGGCTCCCATTGGGCCACATATGGTATCCGCAACGATATATTTGAGCCTGAGATTAAGTTGAAGCCAGGAAAGAATATTGTGAGCTTGCTTAGTGTAACTGTTGGACTACAGAACTATGGACCAAACTATGATAAATGGCCCACTGGTCTGGTTGGACCCATTAGTGTAATCAGCAGAAAAGATGATGAAACCGTTGTTAAAGATCTCTCCTCAAACAAATGGTCTTACAAGGTTGGGTTGCATGGTTGGGACAACAAATTCTTCAGTGAAGACTCTTCTTATGCTTCTGATTCCAAATGGGAATCTGAGTACCTAACCACAAACAGAATGTTGACTTGGTACAAGACCACTTTCAAAGCTCCTCTTGGATCAGAGGGTGTTGTTGTGGATTTGCAAGGAATGGGAAAAGGGTATGCTTGGGTGAATGGTCATAATCTTGGTCGCACATGGCCTAGTTATGAGGCAAGTGAAGATGGTTGTAGTGATGACCCTTGTGACTATCGTGGTGAATATGATGACAAAAAGTACCATGTTCCTCGATCCTTTATCCAAGATGGTCTAAACACAATGGTTTTGTTTGAGGAAATTGGTGGGAATCCATCACTGGTGAATTTCCAAACAGTTTCTGTTGGGTCTGCATGTGGAAACACTCATGAGAACAAGACTTTGGAATTGTCCTGCCATGGACATCCCATTTCTGATATAAAGTTTGCAAGTTTTGGCAACCCACAAGGTGAATGTGGAGCATTTAGCAAGGGAAGTTGCGAAAGCAAAAGTGATGCTTTGACCATAGTACAAAATGCATGTGTGGGCAAGGAATCATGCATCATTGATGTTTCAGAAAAAACATTCGGGCCAGCAAATTGTGGAGATATGGTGAAGAGACTTGCTGTGGAGGCAGTTTGTTAG 1677 0.4126 NWGSKDPHRTAEDVAYSVARFFQSGGTFQNYYMYHGGTNFGRTAGGPYITTTYDYDAPLDEFGNIAQPKWGHLKELHRVLKSMENSLTNYGNVSEVDLGHSVKATVYATNDSSSCFLTNTNTTTDATVTFRGNKYNIPAWSVSLLPDCQTEEYNTAKVNVQTSLMVKGRNKAEDEPTALNWVWRAENIDDALLGKGNFSEKRLIDQKTVASDTSDYLWYMTRLDIDQNDPILSDNMSLSINGSGQVIHAFVNGEHIGSHWATYGIRNDIFEPEIKLKPGKNIVSLLSVTVGLQNYGPNYDKWPTGLVGPISVISRKDDETVVKDLSSNKWSYKVGLHGWDNKFFSEDSSYASDSKWESEYLTTNRMLTWYKTTFKAPLGSEGVVVDLQGMGKGYAWVNGHNLGRTWPSYEASEDGCSDDPCDYRGEYDDKKYHVPRSFIQDGLNTMVLFEEIGGNPSLVNFQTVSVGSACGNTHENKTLELSCHGHPISDIKFASFGNPQGECGAFSKGSCESKSDALTIVQNACVGKESCIIDVSEKTFGPANCGDMVKRLAVEAVC* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2325 558 Gene3D - 465 558 IPR043159 -
Pvu9g2325 558 ProSiteProfiles SUEL-type lectin domain profile. 473 558 IPR000922 GO:0030246
Pvu9g2325 558 Pfam Galactose binding lectin domain 481 558 IPR000922 GO:0030246
Pvu9g2325 558 Gene3D - 329 464 - -
Pvu9g2325 558 Gene3D - 197 328 - -
Pvu9g2325 558 PANTHER BETA-GALACTOSIDASE RELATED 1 549 IPR001944 GO:0004553|GO:0005975
Pvu9g2325 558 Gene3D Glycosidases 1 84 - -
Pvu9g2325 558 SUPERFAMILY Galactose-binding domain-like 142 313 IPR008979 -
Pvu9g2325 558 Pfam Glycosyl hydrolases family 35 1 78 IPR031330 -
Pvu9g2325 558 PANTHER BETA-GALACTOSIDASE 7 1 549 - -
Pvu9g2325 558 Pfam Beta-sandwich domain in beta galactosidase 90 158 IPR041392 -
Pvu9g2325 558 PRINTS Glycosyl hydrolase family 35 signature 27 42 IPR001944 GO:0004553|GO:0005975
Pvu9g2325 558 PRINTS Glycosyl hydrolase family 35 signature 47 63 IPR001944 GO:0004553|GO:0005975
Pvu9g2325 558 PRINTS Glycosyl hydrolase family 35 signature 365 379 IPR001944 GO:0004553|GO:0005975
Pvu9g2325 558 PRINTS Glycosyl hydrolase family 35 signature 392 408 IPR001944 GO:0004553|GO:0005975
Pvu9g2325 558 SUPERFAMILY Galactose-binding domain-like 328 478 IPR008979 -
Pvu9g2325 558 SUPERFAMILY (Trans)glycosidases 2 83 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2325 Pvu-Chr9 33340672 33343809 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2325 1 558 Glycoside Hydrolase AT1G31740 58.571 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2325 - - pvu:PHAVU_009G2251001 1158.28