Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2309 ATGGCAAAGAAATATTTTCCTATGGGTTTCTCTGTTGTTTGCATAACCTTAATCCAGTTCATAGCTTCAATGAGTTTCACCACATCCCAGAGCGTTACAAACGAAATCACAACTAAGGCCCTTTTCATATTTGGCGACTCCACTGTAGATTCCGGCAACAACAACTTCATAGATACTGTTCCAGAGAACAAAGCAGATTACAAACCATACGGACTCAACGGTTTTTTTCATCAACCAACGGGACGATTCTCAGATGGTCGTGTCATTGTAGATTTTATAGCTGAATATACTAAGCTTCCACTAATTCCTCCATTTTTGCAACCAAATGCTGATTATAGCAACGGTGTCAACTTTGCTTCTGGTGGGGCCGGTGTTCTTTCTGAGACCAATCATGGACTGGTGATTGATCTTAGTACACAATTAAGTCACTTTGAAGAAGTGAGGAACTTGTTATCAGAAAAGCTTGGAGAGAAGAAAGCTAAGGAAATGATATCAGAAGCAGTTTATTTCATTAGCATAGGAAGCAACGATTACATGGGTGGTTATCTGGGTAACCCCAAAATGCAAGAAAGCTACAATCCTGAGCAGTATATTGGAATGGTCATTGGAAATTTGACACAGGCCATCCAAATTCTATATGAGAAAGGAGCAAGAAAATTTGGGTTCTTAAGTTTGTCTCCTTTGGGTTGCTTGCCAGCTCTTAGAGCTCTAAACCCTGGAACCAACAAAGATGGTTGTTTTGAGGCAGCTTCTGCTCTTGCTCTAGCACATAATAATGCTTTGAGTAATGTTCTCAGAAGCCTTGACCAAGTCAATGAAGGGTTCATGTACACCAACTCTAATTTCTATGATTGGCTTCAAGATAGAATAGATAACCCCACAAATTATGGTTTCAAAGATGGAGTTAATGCTTGCTGTGGAAGTGGACCATACGGTGGCATCTTCACCTGTGGGGGCACTAAGAAAGTGACAGAGTTCAGCTTATGTGACAATGCTGGTGATCATGTATGGTGGGATGCTTTTCACCCAACAGAGAAGATCCATCAGCAATTCGCCATGGCATTATGGAATGGACCATGCTCCTCTGTAGGGCCATACAATTTGGAGAAGCTCTTCAACAACGAGATCAATCTCACTATAGCTGATGTAGTTGATGCCCCAGAAAATCAGCAAGACGATTTCAGTACTGAGTTTTTTTCTTAG 1203 0.4106 MAKKYFPMGFSVVCITLIQFIASMSFTTSQSVTNEITTKALFIFGDSTVDSGNNNFIDTVPENKADYKPYGLNGFFHQPTGRFSDGRVIVDFIAEYTKLPLIPPFLQPNADYSNGVNFASGGAGVLSETNHGLVIDLSTQLSHFEEVRNLLSEKLGEKKAKEMISEAVYFISIGSNDYMGGYLGNPKMQESYNPEQYIGMVIGNLTQAIQILYEKGARKFGFLSLSPLGCLPALRALNPGTNKDGCFEAASALALAHNNALSNVLRSLDQVNEGFMYTNSNFYDWLQDRIDNPTNYGFKDGVNACCGSGPYGGIFTCGGTKKVTEFSLCDNAGDHVWWDAFHPTEKIHQQFAMALWNGPCSSVGPYNLEKLFNNEINLTIADVVDAPENQQDDFSTEFFS* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2309 400 CDD SGNH_plant_lipase_like 40 359 IPR035669 -
Pvu9g2309 400 Gene3D SGNH hydrolase 26 358 IPR036514 -
Pvu9g2309 400 Pfam GDSL-like Lipase/Acylhydrolase 41 354 IPR001087 GO:0016788
Pvu9g2309 400 PANTHER - 12 383 - -
Pvu9g2309 400 SUPERFAMILY SGNH hydrolase 40 357 - -
Pvu9g2309 400 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 12 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2309 Pvu-Chr9 33082238 33083968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2309 40 374 Acyl Lipid Metabolism Gene Families AT4G10950 33.041 1.74e-60 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2309 - - gmx:100801228 677.937