Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2280 ATGGAAGAAGTTAACGTGGTTAAAACGAAGGGTGGAACAGTTTCAGTAGCTTCTGCATTTGCTGGGCATCAGGAAGCTATACAGAGCAGAGATTACAAATTTTTAAGAATTGCTGTTGAAGAAGCATATAAAGGGGTAGACTCTGAAGATGGTGGTCCCTTTGGTGCTATCATAGTTTGTAATGATGAAGTAGTTGCCAGTTGCCACAACATGGTACTCAGGAACACAGATCCCACTGCCCATGCTGAAGTCACTGCAATAAGAAAGGCTTGTGAAAAGCTAAACCAGATAGAACTTTCGGACTGTGAAATTTATGCTTCATGTGAACCTTGCCCAATGTGCTTTGGAGCAATCCACCTTTCACGAGTTAAGAGATTGGTCTATGGAGCAAAGGCAGAGGCAGCAATTGCTATTGGATTTGATGACTTCATTTCAGATGCATTGAGAGGAACTGGATTCTATCAGAAAGCACAGTTAGAAATTAAAAGGGCTGATGGCAAAGTGGCTAACATTGCTGAAGAAGTTTTTCAGAAAACAAAAGAAAAATTCAGAATGTATTAA 561 0.4029 MEEVNVVKTKGGTVSVASAFAGHQEAIQSRDYKFLRIAVEEAYKGVDSEDGGPFGAIIVCNDEVVASCHNMVLRNTDPTAHAEVTAIRKACEKLNQIELSDCEIYASCEPCPMCFGAIHLSRVKRLVYGAKAEAAIAIGFDDFISDALRGTGFYQKAQLEIKRADGKVANIAEEVFQKTKEKFRMY* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2280 186 Coils Coil 154 174 - -
Pvu9g2280 186 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 29 143 IPR002125 -
Pvu9g2280 186 PANTHER CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN-RELATED 1 185 - -
Pvu9g2280 186 CDD nucleoside_deaminase 35 142 - -
Pvu9g2280 186 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 81 118 IPR016192 GO:0008270|GO:0016787
Pvu9g2280 186 Gene3D Cytidine Deaminase, domain 2 30 185 - -
Pvu9g2280 186 SUPERFAMILY Cytidine deaminase-like 24 145 IPR016193 GO:0003824
Pvu9g2280 186 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 1 185 - -
Pvu9g2280 186 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 30 129 IPR002125 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2280 Pvu-Chr9 32745787 32749557 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2280 - - gmx:100527067 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1288 3 30403201 30405704 Pvu9g2280 9 32745787 32749557 PCT