Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2272 ATGGCTCCAATTCGTTCCACTGGATTCGTTGATCCTGGTTGGGATCATGGCATAGCCCAAGATGAGCGGAAAAAGAAGGTTAGATGCAATTACTGTGGCAAAATTGTTAGTGGTGGGATATACAGATTAAAGCAGCATTTAGCTCGAGTTTCTGGTGAAGTAACATACTGTGAGAAGGCTCCGGATGAAGTCTACCTGAAAATGAAGGAAAATCTGGAAGGCTCTCGTTCCCATAAGAAACAAAAGCAAGTTGATGCACAAGCATACATGAATTTTCACTCAAATGATGATGAAGATGAAGAAGAGCAAGTTGGGTGTAGAAGCAAAGGTAAGCAATTGATGGATGATCGAAATGTATCTGTAAATTTGACTCCTCTTCGCTCCTTAGGATATGTTGACCCAGGGTGGGAGCATGGTGTTGCTCAGGACGAGAGAAAGAAGAAAGTCAAATGCAATTACTGTGAGAAAATTGTTAGTGGTGGTATAAATCGGTTTAAACAACATTTGGCTAGAATTCCTGGAGAGGTAGCACCTTGTAAAAATGCTCCAGAAGAAGTTTATCAGAAAATAAAAGAGAATATGAAATGGCATCGTACTGGGAGAAGACTTAGGCGACCTGAGACTAAGGAATTGATGCCTTTCTATGCAAAGTCAGATAATGATGATGATGAGCTTGAGCATGTTGAAGATGCTTTACATCATATGAACAAGGAAACTTTGATGGATGTTGATAAGAGATTCTCTAAAGATATAATGAAGACCTTCAAGGGAATGCCACCTAGTACTGGTCCTGAACCATTATTGAGAAGATCAAGATTGGATAATGTTTACCTTAAATTGCCCAAGAATCAGACTCCTCAAACTTACAAACAAATAAAAGTTAAGACAGGGCCCACTAAGAAATTACGGAAGGAAGTTATTTCTTCAATTTGCAAGTTCTTTTACCATGCAGGGATTCCTATACAGGCTGCAGACTCTATATATTTTCATAAAATGCTGGAAATGGTTGGTCAATATGGACAAGGACTGGTATGCCAACCAAGCCAACTTCTGTCTGGCCGCTTTTTGCAGGAGGAAATCAATTCTATTAAAAATTACCTTGTTGAATACAAGGCTTCCTGGGCAGTCACTGGTTGCTCTATAATGGCAGATAGTTGGATAGATACACAGGGTAGGACAATCATTAACTTTCTTGTTTCTTGTCCTCATGGTTTATACTTTGTTTCTTCAGTTGATGCCACTAATGTAGTAGAAGATGCACCAAATTTATTTAAGCTTCTGGACAAAGTAGTTGAAGAAGTAGGTGAGGAAAATGTAGTGCAG 1323 0.3915 MAPIRSTGFVDPGWDHGIAQDERKKKVRCNYCGKIVSGGIYRLKQHLARVSGEVTYCEKAPDEVYLKMKENLEGSRSHKKQKQVDAQAYMNFHSNDDEDEEEQVGCRSKGKQLMDDRNVSVNLTPLRSLGYVDPGWEHGVAQDERKKKVKCNYCEKIVSGGINRFKQHLARIPGEVAPCKNAPEEVYQKIKENMKWHRTGRRLRRPETKELMPFYAKSDNDDDELEHVEDALHHMNKETLMDVDKRFSKDIMKTFKGMPPSTGPEPLLRRSRLDNVYLKLPKNQTPQTYKQIKVKTGPTKKLRKEVISSICKFFYHAGIPIQAADSIYFHKMLEMVGQYGQGLVCQPSQLLSGRFLQEEINSIKNYLVEYKASWAVTGCSIMADSWIDTQGRTIINFLVSCPHGLYFVSSVDATNVVEDAPNLFKLLDKVVEEVGEENVVQ 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2272 441 ProSiteProfiles Zinc finger BED-type profile. 130 186 IPR003656 GO:0003677
Pvu9g2272 441 ProSiteProfiles Zinc finger BED-type profile. 8 64 IPR003656 GO:0003677
Pvu9g2272 441 PANTHER HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN ISOFORM 1 32 441 - -
Pvu9g2272 441 PANTHER HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN ISOFORM 1 14 46 - -
Pvu9g2272 441 Pfam Protein of unknown function (DUF 659) 349 441 IPR007021 -
Pvu9g2272 441 PANTHER OSJNBA0013A04.12 PROTEIN 32 441 - -
Pvu9g2272 441 PANTHER OSJNBA0013A04.12 PROTEIN 14 46 - -
Pvu9g2272 441 Pfam BED zinc finger 14 49 IPR003656 GO:0003677
Pvu9g2272 441 Pfam BED zinc finger 136 171 IPR003656 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2272 Pvu-Chr9 32632961 32636825 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2272 - - pvu:PHAVU_009G2201000 887.871