Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2271 GTAATAACTGAAAATACTCCTAACTATAAAGCTGCTGGAAAAATGCTTGAAGAGAAGAGAAGGAATTTGTTCTGGACCCCTTGTGCCACTTATTGTATTAATCAAATGCTTGAAGATTTTTTGAAAATAAGAAGCGTGGAAGAGTGCATGGAAAAGGGTCAGAAAATTACAAAACTAATATACAATCAAATATGGTTGTTAAATCTTATGAAAAGTGAGTTTACCGAGGGGCAGGAGCTTCTAAAACCAGCTGCCACCCGCTTTGCCTCTAGCTTTGCTACACTACAGAGCTTGTTGGATCATCGAGTTGGTCTCAGAAGAATGTTTCTTTCCAATAAATGGATTTTATCCAGATTCTCTAGCTCAAACGAAGGGAAAGAGGTGGAAAAAATTGTTTTGAATGTCACATTTTGGAAGAAAATGCAGTATGTTAGGAAGTCAATAGATCCCATAATGCAAGTACTCAAAAAACTTTATAGTGGTGAGAGCTTGTCAATGCCATATATATATAACGATATGCACAGGGCAAAACTTGCAATCAAATCTGTTCACGGTGATGATGCACGTAAATATGAACCCTTCTGGAAGGTGATAGATAGTCATTGGAACTCTCTGTTCTGTCACCCTCTTTACTTGGCTGCATACTTCTTAAACCCATCATACAGATATCGTCAGGATTTTGTACCGCATTCTGAGGTAGTACGAGGGCTCAATGAATGCATTGTTCGGCTGGAGTCAGATAATATGAGACGGATATCTGCGTCAATGCAGATAGCTCATTATAATTCTGCACAAGATGACTTTGGAACTGAATTGGCAATTAGCACAAGAACTGGTCTAGAACCAGCTGCTTGGTGGCAACAACATGGAATAAGTTGCTTAGAGTTGCAAAGAATAGCTGTACGGATATTAAGTCAGACATGCTCGTCATTTGCATGTGAGCATGATTGGAGTATATATGATCAAATACATTGCAAAAGACAAAATCGTATATCTCAGAAGAAATTGAATGACGTTATATATGTTCACTACAATTTGCGACTTAGAGAATGCCAATTAAGAAAAAGGTCCAGGGACTCAAAGTTGTCCTCTGTTGACAGTGTTCTGCAAGCTCATTTACTTGATGATTGGATAATAGATGCTAATATACAAAGCTCTGATGTTGATAAGAATATTCTTTTTGGAGCTGAACTAGATGATGAATATGAAAATGATTCAATTGATTACGATGGTGGAGGTGCTAGGTCATTAAAGGGATCCCTTGAGCTGGTGACCATGGCTGATTTAGCAGTAGGGTCACCAGATGTTGATCATGCTATGGATGCTGCAACTGATGACGAGTCTGATCTGAATTATTTTGATGATGATTTGAGCGAGTAA 1380 0.3826 VITENTPNYKAAGKMLEEKRRNLFWTPCATYCINQMLEDFLKIRSVEECMEKGQKITKLIYNQIWLLNLMKSEFTEGQELLKPAATRFASSFATLQSLLDHRVGLRRMFLSNKWILSRFSSSNEGKEVEKIVLNVTFWKKMQYVRKSIDPIMQVLKKLYSGESLSMPYIYNDMHRAKLAIKSVHGDDARKYEPFWKVIDSHWNSLFCHPLYLAAYFLNPSYRYRQDFVPHSEVVRGLNECIVRLESDNMRRISASMQIAHYNSAQDDFGTELAISTRTGLEPAAWWQQHGISCLELQRIAVRILSQTCSSFACEHDWSIYDQIHCKRQNRISQKKLNDVIYVHYNLRLRECQLRKRSRDSKLSSVDSVLQAHLLDDWIIDANIQSSDVDKNILFGAELDDEYENDSIDYDGGGARSLKGSLELVTMADLAVGSPDVDHAMDAATDDESDLNYFDDDLSE* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2271 459 SUPERFAMILY Ribonuclease H-like 1 348 IPR012337 -
Pvu9g2271 459 PANTHER HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN 1 394 - -
Pvu9g2271 459 Pfam hAT family C-terminal dimerisation region 274 346 IPR008906 GO:0046983
Pvu9g2271 459 PANTHER OSJNBA0013A04.12 PROTEIN 1 394 - -
Pvu9g2271 459 Pfam Protein of unknown function (DUF 659) 1 56 IPR007021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2271 Pvu-Chr9 32626113 32628617 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2271 - - pvu:PHAVU_009G2201001 923.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2271 9 32626113 32628617 Pvu9g2271 9 32626113 32628617 ECH