Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2248 ATGGATTCCCCACCTTCCCAGCAATCGTGGGGAAGGTCACCCACCTCCCTCTCTTCTTCTGCCTCACTTTCCAAATCCAATTCCAATTCCAATTCCGATTCCATTCAAAGCCTCTCATCGATCCTCAATAACCCTCACGCCTCTGACGCCGCCTCCTGGGGCGCTTGGTGGTCATCCGCCTCCGCCGTTGCGCCGCCCGAATTCGCGCCAATCGCCGCTGCCAAGGCCGCCTCCGAGGTCTCCCGATCGGACTTCCAGCACTACGTCGTGCCTATCGCCGAGGCCTACCATCGCTTCGAGGACATCCGCAACCACACCTCCAAGGAACAGATCAACGACCTCGCCAATGCCGCTGCGTCCTCCGGCCAGGGTGAGGCGCTTGTCGCTTGTTTACGCGAGGTCCCCGCGCTCTACTTCAAGGAGGACTTCCGCCTCGAGGACGGAGCCACGTTCCGCGCTGCCTGCCCCTTCGCCAACGTCGCCGAGAACCTCGCGCTGCAGGAGAAGCTCTCGCACTACCTCGATGTTGTTGAGCTCCATCTCGTGAAGGAGATCTCGCTTCGCTCGTCCTCGTTCTTCGAGGCGCAGGGGCAGCTGCAGGACCTCGATGCTAAGATCCTCCACGGTTGCACGCAAATTCGCCATCTCAAGGATACTATTCGCCTACTCGACGCCGATTTGGTCCAGGACGCGCGCCAGATTCAGGAGCTCAATGGCACCCGGACCAACCTCTTGGCGCTCCTACAGAAACTCCGGCTTATATTCTACGTCAACCAGGCCCTCTCAGCTCTCAAATTGCTTGTTGCATCTGCAGATTGTGCTGGAGCACTGGATGTGACTGATGATTTGCAACATTTACTGGATGGAGATGAGCTCAGTGGTCTACATTGCTTTCGACATCTTAGAGATCATGTAATAGGCTTTATAGAATCCATAAACAGCATTCTTTCAGCAGAGTTTATTCGAGCTTCCTTACAAGATGCTGCAGAAAAAGATGGGATAATTTTATCCAAAGCTAAAGCAACAGCCTCCCTTCCAATGAATGGGAAGGATGATGATGTAAAGTTGGAAGAAGAGGAAAGCAATAATTTCAAAGATTGTCTGCTTCCTACTGTAATTGGATTGCTCAGAACTGCTAAACTTCCCTCAGTTCTGAGGACTTATCGAGATACACTGACTGGTGATATGAAGAATGCTATTAAGACTGCCGTTGCTGAGTTGCTTCCAGTTCTTGCTTCTCGAGGTTCAGAGTCAGAGTTCTTTTCTGGAGACAGAACTGTAGATGCAGATGGTGGAGGTGCATCACTTGCTAGCAAGTTGAGGAGTCTATCATCTGACTGCTTTGTTCATCTTTTGAGTGCTATTTTCTTGATAGTACAGGCACATTTAGTGCGGGCTGCTGAAGTGAAAAGGGCCATTGAATGGATTTTGAACAACCGTGATGGTCATTATGCTGCTGATTCAGTTGTGGCAGCTATTGCTCATGGTGCTGCAGCTGCAGAAACATCCCAAGAAAGTGAGGTTCATGGTACTACACTTTTGCCATATTCATCACAAAGAAGTGTTGCCAAGGGTTCTTCATTTCAGGGAAAATCAATTGATGCTGTGAGCTCCTACAACATGTCAAAAAATTTCAGAGCTGATATATTGCGAGAAAACGCAGAAGCCGTCTTTGCAGCATGTGATGCTGCTCATGGAAGATGGGCAAAGCTTCTAGGGGTCCGTGCAATTCTTCATCCTAGGTTGAAATTGCAGGAGTTTCTAGCCATATATAGCATTACCCAGGAGTTCATTACTGCTACAGAAAAAATTGGTGGGAGATTGGGATATAGCATCCGTGGGACACTGCAATCACAAGCCAAGGCTTTTGTTGATTTTCAGCATGAATCTCGGATGTCAAAGATTAAGGCAGTGCTTGACCAGGAAACCTGGGTGGAGATAGATGTTCCTGATGAATTTCAATCCATCATCAATATGCTTTTTACATCTGATAATTTGACTTCTGAGAACTTCAATGACACTGAGGATGATAATGCAACCAGTTACAATGGTGTGGTCACCAACGATGATTCTATGCCAATGGCAAACAGTGCACAGTCCAGTGCTGAACATCAAATTATGCGGGCTAATTCTATTGAAGCGTCTATGAATAATGAAACATCAGATAGATCCAAATCCCTGGATGATTCAATGGAACCAAATAAAGGTCACGGTAGGATTACATCAGCACATGGTAACAATACTGAGAAAGACCATAAAAAATCTGCATCTCAGGCTCTTAATTACAAGGGTGTTGGTTATCACATGGTAAACTGTGGCTTAATATTGCTGAAGATGTTGTCAGAGTACATTGATATGAACAACCTTTTGCCAACACTATCTTCAGAAGTTGTTCACCGTGTAGTAGAAATCTTGAAGTTTTTCAATACAAGAACATGCCAACTTGTGCTCGGGGCTGGTGCTATGCAGGTGTCTGGTTTGAAGTCCATCACATCTAAACACCTGGCATTGGCAAGTCAAGTCATCAGTTTTGTACATGCTATTATTCCTGAGATTCGGCAGATTCTTTTTCTTAAAGTACCCGAGACAAGAAAAATACTATTGCTTTCTGAGATTGATCGGGTTGCACAGGATTATAAAGTTCATAGAGATGAAATACATAGTAAATTAGTTCAAATAATGCGAGAAAGATTACTAGTACATTTACGTGGGCTGCCTCAAATTGTTGAGAGTTGGAATAGACCTGAGGATGCAGACCCTCAGCCTAGTCAATTTGCCCGGTCCCTTACTAAGGAAGTTGGGTACCTCCAACGTGTTCTATCTCGAACTTTGAATGAAGAAGATGTTCAAGCAATTTTCGGGCAAGTGGTCATTATATTTCACTCACAAATTTCAGAAGCATTTTCAAGATTTGATATTAGCACTCCTCAAGCACAGAATAGGTTATATCGAGATGTCAAGCATATTCTCCAATGCATACGGTCATTGCCATTGGGTGATTTGAGTAAATCTGATACCCCTAACTGGGGTCAGCTGGATGAATTCTTGGTGAAAAGATTTGGAAATGATGCTGTTCAGTAA 3081 0.4576 MDSPPSQQSWGRSPTSLSSSASLSKSNSNSNSDSIQSLSSILNNPHASDAASWGAWWSSASAVAPPEFAPIAAAKAASEVSRSDFQHYVVPIAEAYHRFEDIRNHTSKEQINDLANAAASSGQGEALVACLREVPALYFKEDFRLEDGATFRAACPFANVAENLALQEKLSHYLDVVELHLVKEISLRSSSFFEAQGQLQDLDAKILHGCTQIRHLKDTIRLLDADLVQDARQIQELNGTRTNLLALLQKLRLIFYVNQALSALKLLVASADCAGALDVTDDLQHLLDGDELSGLHCFRHLRDHVIGFIESINSILSAEFIRASLQDAAEKDGIILSKAKATASLPMNGKDDDVKLEEEESNNFKDCLLPTVIGLLRTAKLPSVLRTYRDTLTGDMKNAIKTAVAELLPVLASRGSESEFFSGDRTVDADGGGASLASKLRSLSSDCFVHLLSAIFLIVQAHLVRAAEVKRAIEWILNNRDGHYAADSVVAAIAHGAAAAETSQESEVHGTTLLPYSSQRSVAKGSSFQGKSIDAVSSYNMSKNFRADILRENAEAVFAACDAAHGRWAKLLGVRAILHPRLKLQEFLAIYSITQEFITATEKIGGRLGYSIRGTLQSQAKAFVDFQHESRMSKIKAVLDQETWVEIDVPDEFQSIINMLFTSDNLTSENFNDTEDDNATSYNGVVTNDDSMPMANSAQSSAEHQIMRANSIEASMNNETSDRSKSLDDSMEPNKGHGRITSAHGNNTEKDHKKSASQALNYKGVGYHMVNCGLILLKMLSEYIDMNNLLPTLSSEVVHRVVEILKFFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQVISFVHAIIPEIRQILFLKVPETRKILLLSEIDRVAQDYKVHRDEIHSKLVQIMRERLLVHLRGLPQIVESWNRPEDADPQPSQFARSLTKEVGYLQRVLSRTLNEEDVQAIFGQVVIIFHSQISEAFSRFDISTPQAQNRLYRDVKHILQCIRSLPLGDLSKSDTPNWGQLDEFLVKRFGNDAVQ* 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2248 1026 PANTHER VACUOLAR PROTEIN SORTING 54 1 1025 IPR039745 GO:0000938|GO:0042147
Pvu9g2248 1026 MobiDBLite consensus disorder prediction 1 38 - -
Pvu9g2248 1026 Gene3D - 865 904 - -
Pvu9g2248 1026 Pfam Vps54-like protein 767 897 IPR012501 GO:0042147
Pvu9g2248 1026 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 54, CHLOROPLASTIC 1 1025 - -
Pvu9g2248 1026 MobiDBLite consensus disorder prediction 713 755 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2248 K17600 - gmx:100804432 1705.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2248 9 32391281 32414141 Pvu9g2248 9 32391281 32414141 ECH