Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2246 ATGTCCCCATGGGTCCCTTCCCACTTTTCCTTCATTTCTATACTCTCGTTTATTGGTTCCAGCTCCTCTGTCCCTCTCACACTCACTGCACCTTTGCTTTTTTGCTACCTTCTACCCACTCCTTCTTCTTTTCCTCTTCTTCAATCTCAACTCGTATGTTACTCTAACTTCTATCGCACCTTCGCTTCCAGTTCGTTCAGTTTCTGGAACCTTCGCGCTCCAATGGAAGTGTCGTCGGAGCAGTCTGGCCAGGATGTGGCGCCGGAAAAGGCTTTCGGTTCTCCGAAGAGGAACGTTCCAGAAGCTTCCAGGAGAGCTCCGAAAATCACCGCGGACTCTGGCGGTGCGGTGAAAAGGAGAGTTGAACCGCGGACCGGTTCGACTGCCGGTGCCGGCTCGGCTGCGTCGAGGAGATCGGGTTCGGTTGGCGCTTCGGCGAGTTCGGTTTCCGCGCCGAGACGGAACAGTACTGGAGGATTGTCTCAGAAGATGTCGATCTCTGCTGGCGGGAGAAAAAGCGGTGCTGAGTCTGTTGGTGGAGGTAAGAGCGGCGTTTCGTCGGCGAGTGAACCTATCCGGAAGTCGCTGCCGGAGCTCCGGCGTAATTCTGTGACTTCTTCACGTGCTGGCGCTGCGGGGAATCCGGTTGCGGCCTCGCTGGTTGGCTCGGGGTCTAGGACTTCTGGTGTGAGTAAGGCGGAGGTTGCGAGGAAGCCGGTGAGTAAGCCGGCATTGTCGGGTTCGGGTTCGGCTTCGTCTGCTACGAGGAGGATTAGTTCTTTGTCGATGGATAGCACTGCCAGCAGTGGAGGTTCTGCTCGAAGGACGGTTTCCAGGGTTTCTTCGCCGACGGTTTCCAGCGGGTTGAAGACGGGCTCTCTGTCGACGTCGCAGGATAGAGCTTCTGCACTGTCTGGAAGGAGGAAGGGAGGCACTCCTGATAGCCGGGATTCGCGGTTTATTGTGCTTCCTCAGGTTGAGATTAAGGCCAACGATGAGTTGAGACTGGATCTAAGGGGACACAGAGTTCGCAGTCTCACTGCCAGTGGATTAAACTTATCCTCAAACTTAGAGTTTGTTTATCTCCGAGACAATCACTTGTCTACACTGGAAGGAGTAGAAATATTGACGAGAGTGAAGGTTCTTGATTTGAGTTTTAATGATTTTAAGGGGCCTGGATTTGAGCCTCTTGAGAATTGCAGAGTACTGCAGCAACTCTATCTTGCTGGAAATCAAATTACATCATTGGCAAGTCTCCCTCAACTTCCTAATTTGGAGTTCCTTTCAGTAGCTCAGAATAAGTTGAAGTCTCTCACTATGGCTAGCCAACCTCGACTGCAGGTCTTAGCTGCCAGCAAAAACAAAATTTGTACTCTTAAGGGTTTCCCATATTTACCTGTTCTTGAGCATTTGCGAGTGGAGGAAAATCCTATACTTAAGATGCTTCATTTGGAAGCAGCCTCAATATTACTAGTTGGACCTACTTTGAAAAAGTACAATGACAGAGATCTCTCTCGTGAGGAAGTGGCTCTAGCAAAGCGCTATCCTGCACATACAGCTTTATGCATTAGAGATGGTTGGGATTTCAGTCGCCCTGAGCAAGCTGCAGACTCAACTTTCCACTTTTTAGTTGATAAATGGAAAGACCATATTCCTCCGGGTTTTCTTCTCAAAGAAGCCTCCATAGATAAACCCGTGGAAGAAGATGTGTGTCGTTGTCACTTCACCATTATTCATGATGGTGCAACTAGTACAGGCCCTCCATTAGATTTAAAATATCAATGGTTTTATGGTGATCTATCGCTTTCAAATTTTTTCCCTATTCCAGATGCTACCGGTGAGGTTTACTGGCCAAAGCATGATGACATTGGAAAAGTTCTGAAGGTGGAATGCACCCTCACTTTAGAAGAAATAACATATCCTCCTATATTTGCCATCTCACCTCGTATTTCGAGAGGGAATGGAATTCCAAAGGTTGTAAATCTTGAAGTATATGGGGAACTGGTTGAAGGAAGTATTATCAGGGGTTGTGCTAAGGTTGCTTGGTGTGGTGGAACTCCAGGAAAAGGTGTTGCTAGTTGGTTACGGAGAAAGTGGAACAGCAGTCCTGTGGTCATTGTTGGGGCAGAAGATGAAGAGTATAAGTTAACCATTGATGATGTTGATTCAAGTTTAGTTTTCATGTACACACCAGTAACAGAAGAAGGTGCAAAAGGAGAGCCTCAGTACAAATATACAGATTTTGTAAAAGCTGCTCCTCCTCGTGTCAGTAATGTGAAAATAGTTGGAGAAGCTGTTGAGGGATGTACCATCAAAGGAGTTGGTGATTACTTTGGTGGAAGGGAGGGTCCGAGTAAGTTTGAATGGTTGCGGGAGAACATGGAATCTGGAGGCTTCTTGTTAGTGTCAGCTGGCACATCTGAGTATACCTTGACCAAAGAAGATGTTGGTTGTTGTCTGGCTTTTGTTTACATACCCATTAATTTTGAAGGCCATGAAGGAAAATCTATATCTGTAATGTCTCCTCTGGTGAAACAAGCACCTCCAAAGGTAACAAATGTCAAAATAATTGGCGATCTACGAGAGAATAGTAAGGTCACTGCTACTGGTATTATAACTGGAGGAACTGAAGGATCTAGCAGAGTTCAGTGGTATAAAACATATTTTTCAACTTTGGATGAAAACAGTCTTGAAGCATTAAGTACTTCCAAAATTGCCAAAGCATTCCGCATACCTCTTGGAGCTGTTGGCTATTACATTGTGGCAAAATTTATTCCCATGAATCCTGATGGTGATTCTGGGGTACCAGTGTTTGTAATATCTGATAAAGCAGTTGAGACTCTTCCCCCAAGCTTGAATTTCTTATCTATCATTGGGGATTACAATGAAGATGGAATTTTGACAGCTTCATATGGATATGTTGGAGGTCACGAAGGAAAGAGTATATACAGTTGGTATATTCATGAGGTTGAAGGTGATTCAGGTTCTCGGATACCAGGGGTTTCGGGACTGCAGTACCGTATCACCAAAGAAGCCATTGGAAAATTCATCTCATTCCAGTGTACTCCAGTACGGGATGATGGTGTTGTTGGTGACGTAAGAATTTGCATGGGCCAGGAGCGCGTTCGCCCTGGAAGCCCAAGATTGCTTTCTTTACACATAATTGGAAATGCTGTTGAAGGAACGATTCTAAGAATTGAAAAAAAGTATTGGGGTGGTGATGAGGGAGATTCAGTTTACCGCTGGCTTAGGACCACTTCTGATGGCACAAAAAGAGAAATCGCGGGTGCCAATGCTGCATCATATATGCCCTCAATTGATGACATTGGCTCCTTTATTTCTGTTTCATGCGAGCCTGTCCGAAGTGATTGGGCACGTGGACCTATGGTTCTGTCTCAACAAATTGGGCCTATAATACCTGGTTCCCCAACTTGTCATTCTCTGGAATTTTCTGGATCAATGATCGAAGGGCAGCACATAAGCTTTAATGCTGTGTATACTGGAGGGGAGCAAGGAGATTGTACCCATGAGTGGTTTAGGGTAAAAGACAATGCTGTGCGAGAGAAAATAAGTAGCAATGACTTTTTGGATTTGACTCTTGAGGATGTTGGTGCGTGCATTGAAATAATATATACTCCTGTGCGCAAAGATGGAACCAAAGGCAGCCCAAAGCATATTGTGTCTGATATGATTTCTCCTGCGGATCCTAAGGGAATAGAGCTCTTAATTCCTGATTGCTGTGAAGACAGAGAGCTTATGCCACTGAGAAAATATTTTGGTGGACATGAAGCGGTTGGAGAGTATATTTGGTATCAGACAAAGTGTAAACTTGAAGGATCGGAACTGCTAGATATATCTAATGCCTCTGACGTTGTAATATGTGGGACAGAGATGATGTATAAACCATTGCTTAAAGATGTTGCAGCTTACTTGGCTTTATATTGGGTGCCGACTCGAGCAGATGGAAAATGTGGGGAGCCATTGGTTGCAATTAGCAGTACCCCGGTTTCCCCTGCTCCTCCAGTAGTTTCTAATGTACACGTGAAAGAGTTGTCTACCGGAATTTATTCTGGAGAAGGTGAATATTTTGGTGGACATGAAGGAGAAAGTCTCTTTAGCTGGTATAGAGAAAATAATGAGGGAACTGTTGAACTAGTTAATGGAGCAAATTCTAAAATCTATGAAGTTACTGATTCGGATTACAATTTTCGATTGTTGTTTGGATATACACCTATTCGATCAGATTCAGTTGTGGGAGAACTTATTTTATCTGCTCCGACTAATATTGTGTTCCCAGAGTTTCCATGCGTGGAGATGCTTGCTCTGACTGGAAAGGCAGTTGAAGGTGATGTTCTTACAGCTGTTGAAGTGATTCCAAATAGTGAGACTCAGCGACATGTTTGGAGCAAGTACAAGAAAGATATAAGATACCAATGGTTTTGTTCATCAGAAGTTGGAGACAGTCTTTCGTATGATCCATTACCTAATCAGAGTTCTTGCTCCTATAAGGTGCGGCTAGAGGATATTGGTCATCACTTAAAATGTGAGTGTATCGTAACTGATGTGTTTGGAAGGTCAAGTGATGCAGTATGCATTGAGACAACACCTGTATTGCCAGGAATTCCTAGAATACACAAGCTTGAGATTGAGGGAAGGGGATTTCATACCAATCTCTACGCTGTTCATGGCATTTACAGTGGTGGAAAGGAAGGCAAAAGTAGAGTTCAGTGGCTTAGATCAATGGTTGGAAGTCCTGACTTGATCTCCATACCAGGAGAAACTGGCAGAATGTATGAAGCGAATGTTGATGATGTTGGCTATAGGCTAGTGGCTATCTATACTCCTGTAAGAGATGATGGAGTAGAGGGGCAATCAATTTCGGTATCCACAGAGCCAATAGCAGTTGAGCCCGATGTTCTTAAAGAAGTGAAGCACAACCTTGAACTTGGATCAGTGAAGTTTGAGGTATTATGTGACAAAGACCAAACCTCAAAAAAGATTTCATCAGTGGGCACATACGAGAGACGTATCCTTGAAATTAACAGGAAAAGGGTGAAGGTTGTAAAGCCTGCCACGAAGACTTCTTTTCCAACTACAGAACTTCGTGGTAGTTATGCCCCTCCCTTTCATGTGGAGCTTTTCAGGAATGATCAACACCGTCTTAGGCTTGTAGTGGACAGTGAGAATGAAGCAGATTTGATGGTGCACTCCCGACACATTCGGGATGTTATTGTTCTTGTGATTCGAGGACTTGCTCAGCGATTCAACAGTACTTCTCTCAATTCCCTTCTCAAGATAGACACATAA 5307 0.4456 MSPWVPSHFSFISILSFIGSSSSVPLTLTAPLLFCYLLPTPSSFPLLQSQLVCYSNFYRTFASSSFSFWNLRAPMEVSSEQSGQDVAPEKAFGSPKRNVPEASRRAPKITADSGGAVKRRVEPRTGSTAGAGSAASRRSGSVGASASSVSAPRRNSTGGLSQKMSISAGGRKSGAESVGGGKSGVSSASEPIRKSLPELRRNSVTSSRAGAAGNPVAASLVGSGSRTSGVSKAEVARKPVSKPALSGSGSASSATRRISSLSMDSTASSGGSARRTVSRVSSPTVSSGLKTGSLSTSQDRASALSGRRKGGTPDSRDSRFIVLPQVEIKANDELRLDLRGHRVRSLTASGLNLSSNLEFVYLRDNHLSTLEGVEILTRVKVLDLSFNDFKGPGFEPLENCRVLQQLYLAGNQITSLASLPQLPNLEFLSVAQNKLKSLTMASQPRLQVLAASKNKICTLKGFPYLPVLEHLRVEENPILKMLHLEAASILLVGPTLKKYNDRDLSREEVALAKRYPAHTALCIRDGWDFSRPEQAADSTFHFLVDKWKDHIPPGFLLKEASIDKPVEEDVCRCHFTIIHDGATSTGPPLDLKYQWFYGDLSLSNFFPIPDATGEVYWPKHDDIGKVLKVECTLTLEEITYPPIFAISPRISRGNGIPKVVNLEVYGELVEGSIIRGCAKVAWCGGTPGKGVASWLRRKWNSSPVVIVGAEDEEYKLTIDDVDSSLVFMYTPVTEEGAKGEPQYKYTDFVKAAPPRVSNVKIVGEAVEGCTIKGVGDYFGGREGPSKFEWLRENMESGGFLLVSAGTSEYTLTKEDVGCCLAFVYIPINFEGHEGKSISVMSPLVKQAPPKVTNVKIIGDLRENSKVTATGIITGGTEGSSRVQWYKTYFSTLDENSLEALSTSKIAKAFRIPLGAVGYYIVAKFIPMNPDGDSGVPVFVISDKAVETLPPSLNFLSIIGDYNEDGILTASYGYVGGHEGKSIYSWYIHEVEGDSGSRIPGVSGLQYRITKEAIGKFISFQCTPVRDDGVVGDVRICMGQERVRPGSPRLLSLHIIGNAVEGTILRIEKKYWGGDEGDSVYRWLRTTSDGTKREIAGANAASYMPSIDDIGSFISVSCEPVRSDWARGPMVLSQQIGPIIPGSPTCHSLEFSGSMIEGQHISFNAVYTGGEQGDCTHEWFRVKDNAVREKISSNDFLDLTLEDVGACIEIIYTPVRKDGTKGSPKHIVSDMISPADPKGIELLIPDCCEDRELMPLRKYFGGHEAVGEYIWYQTKCKLEGSELLDISNASDVVICGTEMMYKPLLKDVAAYLALYWVPTRADGKCGEPLVAISSTPVSPAPPVVSNVHVKELSTGIYSGEGEYFGGHEGESLFSWYRENNEGTVELVNGANSKIYEVTDSDYNFRLLFGYTPIRSDSVVGELILSAPTNIVFPEFPCVEMLALTGKAVEGDVLTAVEVIPNSETQRHVWSKYKKDIRYQWFCSSEVGDSLSYDPLPNQSSCSYKVRLEDIGHHLKCECIVTDVFGRSSDAVCIETTPVLPGIPRIHKLEIEGRGFHTNLYAVHGIYSGGKEGKSRVQWLRSMVGSPDLISIPGETGRMYEANVDDVGYRLVAIYTPVRDDGVEGQSISVSTEPIAVEPDVLKEVKHNLELGSVKFEVLCDKDQTSKKISSVGTYERRILEINRKRVKVVKPATKTSFPTTELRGSYAPPFHVELFRNDQHRLRLVVDSENEADLMVHSRHIRDVIVLVIRGLAQRFNSTSLNSLLKIDT* 1769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2246 1768 MobiDBLite consensus disorder prediction 245 303 - -
Pvu9g2246 1768 MobiDBLite consensus disorder prediction 129 168 - -
Pvu9g2246 1768 MobiDBLite consensus disorder prediction 79 317 - -
Pvu9g2246 1768 ProSiteProfiles Leucine-rich repeat profile. 356 377 IPR001611 GO:0005515
Pvu9g2246 1768 Gene3D - 951 1033 - -
Pvu9g2246 1768 Gene3D - 1436 1530 - -
Pvu9g2246 1768 Gene3D - 576 643 - -
Pvu9g2246 1768 Gene3D - 1048 1126 - -
Pvu9g2246 1768 PANTHER EXPRESSED PROTEIN 97 1768 - -
Pvu9g2246 1768 Gene3D Ribonuclease Inhibitor 327 490 IPR032675 -
Pvu9g2246 1768 SUPERFAMILY Outer arm dynein light chain 1 335 486 - -
Pvu9g2246 1768 ProSiteProfiles Leucine-rich repeat profile. 402 423 IPR001611 GO:0005515
Pvu9g2246 1768 PANTHER 187-KDA MICROTUBULE-ASSOCIATED PROTEIN AIR9 97 1768 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2246 - - pvu:PHAVU_009G217700g 3389.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2246 9 32336479 32369486 Pvu9g2246 9 32336479 32369486 ECH