LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu9g2241	ATGGCGGAGGAAGCGGAAGAGACGATAAACGCAGTCAGAATATTTGTCGGAGGATTGGCGGAAGCCGTCAGCGCCGAAGACCTTCGAAGCTTATTCTCCTCTCTCGGCACCGTCCAAGCCGTTCAAACCATCCGAACTAAAGGTCGCAGCTTTGCCTACATCGATTTTCAATCCAATCCTAAATCCCTTTCCAAGCTCTTCAGCAAGTATAATGGGTGTCTTTGGAAGGGTGGAAAGCTGAGACTGGAGAAGGCCAAAGAAGACTATCTCGCACGGATGAAGAGAGAATGGGAGCATGACGCTCTTGATGATGCTACTCAACCACCCCCTAGTTCTCCTAAGGACACCACCGGAGACTCTTCCAAGTCAAATACCAAACACCTCAATATTTTCTTTCCCAGATTGAGAAAGGTGAAAACCATACCATTCAGTGGAACTGGCAAGCACAAATACAGTTTTCAGAATATTAAAGTTCCTCCACTTCCTGTGCATTTTTGTGATTGTGAGGAGCATTGTAGTCCTTTTGTCACTGAAAAAGGGAAACTATATATTAATGGGGCAGCCGAAAGAGGTGGAATGAATGATGAAGAGATTAGCATAATGAATGCTGTGATGAACAAGCTACTTCAAAAAGAAAAGGTTTCCAGTGCCGAGAAGCTTGGAAAGGAGAAGGATTCTTACAAATCACCTGATGCTTTACAATCTGATGAAGATAGTGCAACAGATGAAGATGATCTCATTATTAACATGGAGATGAAGACAAATAAAACAGCTTTAATAGGGAACCAGGAACTTGAAAGAATCCTGGAAAATAAGGAATCATGGTTGAATATAACAAAAATTGCTAAGGAAGAACCCAACAAGAGTATGCCTCAAGTAGAGAAAAGGAATAATAGCAATCTCAACAAGAACAAGAAGAGGAAATCAATTCCCGCATTGGAAATGGAAAGTAATGCAGAAACAACCCCTGGAGGCAAGGGTAATATGCAGAATAAGGTGGGATCTGGTGACCCGGAAGATGTTTTTGGGGAATTGACTAAAGTTTCATGGTCTCAAAAGTCTTCATGGAAAGAACTTCTTGGTGGCGGAGGCAATACTTCTTTCAGTGCTTCTCTCATATTGCCAAAGTTGGACTCTAGTAAGAATCTACAAACATCTGATGACCTGTGTGCACCTCTATCTACAAACAACAAAACTGAAAACATGGAAAGGGACAGAGAATTATGGAGCCGCCCTACCAATACGCAAGTGATAAAAGATCAAACTGAAGCTCAACCTACCAATACGCAAGTGATAAAAGATCATACTGCAGCTCAACCTACCAATAAACAAGTGATAAAAGATGTTACTGAAAATCAGCATGATGTGGCACCTAATAAGACAGGCAGAGGAGCTTCATGGCTGCAAAAACAATCCTGGACACAAATGGTTAGTGAGAATAACAATTCATTTAGCATTTCACATATTTTGCCTGGTATTACGTTCCCAGAGCCAAAGGCCAAGGACCCCATTGTGGAACCTGCCATTTCCAACTATTTCAAGCATAATGGTGTAGCTAAGGATACTATTAATAATGTTGTGAGTGATGGTTTTAAATCAAGGGAGACTATACAAGAAAATAGTCAGTATATCGGTGCCAATGACATTGCTTTTGCTCCAGTAGTTGAGGAAAAAGTTGAAACAAGTCCCAGGGAAAAATCCACTGAAAATATTGAAATAGGTGAAACGTGCTCATTTATGAGAAGTGCTGCATCTATGAAGGAATGGGCAAAAGCTAAGGCCGCTGTAAGTGGATCACTCAAAAGAAAAAGTGGTGAGAAGTAA	1824	0.4123	MAEEAEETINAVRIFVGGLAEAVSAEDLRSLFSSLGTVQAVQTIRTKGRSFAYIDFQSNPKSLSKLFSKYNGCLWKGGKLRLEKAKEDYLARMKREWEHDALDDATQPPPSSPKDTTGDSSKSNTKHLNIFFPRLRKVKTIPFSGTGKHKYSFQNIKVPPLPVHFCDCEEHCSPFVTEKGKLYINGAAERGGMNDEEISIMNAVMNKLLQKEKVSSAEKLGKEKDSYKSPDALQSDEDSATDEDDLIINMEMKTNKTALIGNQELERILENKESWLNITKIAKEEPNKSMPQVEKRNNSNLNKNKKRKSIPALEMESNAETTPGGKGNMQNKVGSGDPEDVFGELTKVSWSQKSSWKELLGGGGNTSFSASLILPKLDSSKNLQTSDDLCAPLSTNNKTENMERDRELWSRPTNTQVIKDQTEAQPTNTQVIKDHTAAQPTNKQVIKDVTENQHDVAPNKTGRGASWLQKQSWTQMVSENNNSFSISHILPGITFPEPKAKDPIVEPAISNYFKHNGVAKDTINNVVSDGFKSRETIQENSQYIGANDIAFAPVVEEKVETSPREKSTENIEIGETCSFMRSAASMKEWAKAKAAVSGSLKRKSGEK*	608

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu9g2241	607	PANTHER	TRANSCRIPTIONAL REGULATOR	3	605	-	-
	Pvu9g2241	607	ProSiteProfiles	Eukaryotic RNA Recognition Motif (RRM) profile.	12	87	IPR000504	GO:0003723
	Pvu9g2241	607	MobiDBLite	consensus disorder prediction	286	336	-	-
	Pvu9g2241	607	Gene3D	-	2	90	IPR012677	-
	Pvu9g2241	607	SUPERFAMILY	RNA-binding domain, RBD	3	98	IPR035979	GO:0003676
	Pvu9g2241	607	MobiDBLite	consensus disorder prediction	100	125	-	-
	Pvu9g2241	607	MobiDBLite	consensus disorder prediction	216	232	-	-
	Pvu9g2241	607	SMART	rrm1_1	13	83	IPR000504	GO:0003723
	Pvu9g2241	607	CDD	RRM_NOL8	13	86	IPR034138	-
	Pvu9g2241	607	MobiDBLite	consensus disorder prediction	216	244	-	-
	Pvu9g2241	607	MobiDBLite	consensus disorder prediction	109	125	-	-
	Pvu9g2241	607	Pfam	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	14	59	IPR000504	GO:0003723

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu9g2241	-		-	vra:106759673	1005.36

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu9g2241	9	32077266	32080866	Pvu9g2241	9	32077266	32080866	ECH