Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2238 ATGGCTTGCGTGAAATTGGGTTCCAAAACTGATGCTTTCCAGCGTCAAGGGCAGGCCTGGTTCTGCACGACTGGGCTTCCTAGTGATATAGTTGTTGAAGTTGGAGAGATGTCCTTTCATCTTCACAAGTTCCCTTTGCTCTCTAGAAGTGGTGTTCTGGAAAGAAGGATTGCTGAGGTTTCTGAATCAGAGGAAGAATGTGTCATATCCCTCAGTGACATTCCTGGCGGTGCCAAAACATTTGAACTTGTTGCAAAATTCTGCTATGGAGTGAAACTTGAACTGACATCATCAAATGTTGTGTACCTCTGGTGTGCTGCAGAGCTTCTAGAAATGACTGAGGAATATGGTGAAGGTAATCTTATTACACAGGCTGAAACCTTTTTCAATCAAGTGGTACTCCGCAGTTGGAAAGACTCTCTGAGGGCACTTCAAACCTGTGACGATGTTTCGGACCATGCTGAAGAGCTCCACATTGTGAAAAGATGTATTGAGTCACTAGCAGCAAAGGCGTCTACCGACCCAAATTTATTCGGGTGGCCAGTGCTGGAGCGTGGTGGTCCTTTGCAGAGCCCTGGTGGAAGTGTTTTGTGGAATGGAATAAGTACTGGGGCAAGACCAAAAAATTCAAGTGCAGATTGGTGGTATGAGGATGTATCGAATTTGAGTTTACCTCTTTATAAGAGATTAATAGATATCATGGAATCTCGAGGCATTAGGCAGGAGATTATCGCCGGTTCTCTTGCTTTCTATGCTAAAACATATCTGCCTATGTTAAATCGACGTCAGGTTTCTGGTGAGTCCAGCACCCGCCTTACACAGGTAGCTATGGGGTCTCCACTATCTGAAGATGACCAGAAGATTCTGCTGGAAGAGATTGATGGTTTGCTCTCAATGCAGAAGGGCCTGGTCCAAACAAAGTTCTTGTTTGGTTTACTTCGAACAGCCATGATTCTACGAGTGAGCCCCTCTTGCATATCTAATTTGGAAAAACGGATCGGCATGCAGCTTGACCAAGCTACTCTAGAAGATCTCTTAATGCCAAATTTCTCATATTCTATGGAGACACTTTACAATGTTGACTGTGTGCAAAGAATTCTTGACCATTTCCTTGCCATGGATCAGGTTACTGGCTGTGCCTCTCCATGCTCAATCGACGATGGTCAATTGATTGGATCACCTTCATTAACACCAATCACCATGGTAGCCAAGCTGATTGATGGTTACCTTGCAGAGGTTGCCCCAGATATTAATTTAAAACTTCCCAAGTTTCAGGCCCTCGCCGCAGCAGTTCCCGAGTATGCCCGGCCTTTGGATGATGGTTTATATCGTGCATTAGATATTTACTTGAAGTCTCACCCATGGTTGGTGGAGTCTGAGAGAGAGCAGCTATGTAGGCTGATGGATTGCCAGAAGCTCTCATTAGAGGCATGCACGCATGCGGCGCAGAACGAGAGGCTACCGATCAGAACAATCTTTCAAGTTCTATTTTTCGAGCAGCTTCAGCTCCGGACTTCCATAGCCGGTTGCTTTCTAGTTTCGGATAATCTGGACGGATCGAGGCAGTTGAGAAGTGGTGTTGTTGGATCTACAGAGGGTGGGTGGGCATCAGCAGTGAAGGAAAATCAGGTTTTGAAAGTGGGAATGGACAACATGAGGATGAGGGTGTGTGAGCTTGAGAAGGAATGTTCAAACATGAGGCAGGAGATTGAGAAATTGGGTCGTTCAAAGGGATCAAGCGCCTGGGGAACTGTTTCTAAGAAACTTGGGTTTAAGATGAAGTCTCAGATGTGTAGTGCTCAAGAAGGGTCAGTTAGCAACCAGAACAATGCAAATAATAAGGTTGAGAAGTTGAAAGAAAGACATGTAAAGCACAAGAAAAGTTCTTCTATTAGTGACAAAGCATCAGTTTCTTCAATTGTTCATTCATAG 1932 0.4477 MACVKLGSKTDAFQRQGQAWFCTTGLPSDIVVEVGEMSFHLHKFPLLSRSGVLERRIAEVSESEEECVISLSDIPGGAKTFELVAKFCYGVKLELTSSNVVYLWCAAELLEMTEEYGEGNLITQAETFFNQVVLRSWKDSLRALQTCDDVSDHAEELHIVKRCIESLAAKASTDPNLFGWPVLERGGPLQSPGGSVLWNGISTGARPKNSSADWWYEDVSNLSLPLYKRLIDIMESRGIRQEIIAGSLAFYAKTYLPMLNRRQVSGESSTRLTQVAMGSPLSEDDQKILLEEIDGLLSMQKGLVQTKFLFGLLRTAMILRVSPSCISNLEKRIGMQLDQATLEDLLMPNFSYSMETLYNVDCVQRILDHFLAMDQVTGCASPCSIDDGQLIGSPSLTPITMVAKLIDGYLAEVAPDINLKLPKFQALAAAVPEYARPLDDGLYRALDIYLKSHPWLVESEREQLCRLMDCQKLSLEACTHAAQNERLPIRTIFQVLFFEQLQLRTSIAGCFLVSDNLDGSRQLRSGVVGSTEGGWASAVKENQVLKVGMDNMRMRVCELEKECSNMRQEIEKLGRSKGSSAWGTVSKKLGFKMKSQMCSAQEGSVSNQNNANNKVEKLKERHVKHKKSSSISDKASVSSIVHS* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2238 643 Coils Coil 608 628 - -
Pvu9g2238 643 Pfam BTB/POZ domain 27 113 IPR000210 GO:0005515
Pvu9g2238 643 PANTHER OS12G0117600 PROTEIN 1 617 IPR043454 -
Pvu9g2238 643 CDD BTB_POZ_NPY3-like 19 122 - -
Pvu9g2238 643 Gene3D Potassium Channel Kv1.1; Chain A 14 139 IPR011333 -
Pvu9g2238 643 SUPERFAMILY POZ domain 16 114 IPR011333 -
Pvu9g2238 643 SMART BTB_4 28 133 IPR000210 GO:0005515
Pvu9g2238 643 ProSiteProfiles BTB domain profile. 28 97 IPR000210 GO:0005515
Pvu9g2238 643 ProSiteProfiles NPH3 domain profile. 213 502 IPR027356 -
Pvu9g2238 643 Pfam NPH3 family 213 478 IPR027356 -
Pvu9g2238 643 MobiDBLite consensus disorder prediction 600 643 - -
Pvu9g2238 643 PANTHER - 1 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2238 Pvu-Chr9 32046707 32050944 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2238 8 631 EF-hand Containing Proteins AT3G44820 46.237 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2238 - - gmx:100794676 1185.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2238 9 32046707 32050944 Pvu9g2238 9 32046707 32050944 ECH