Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2234 ATGGATCACCATGAGGATGAAAGTAACAGCAAACAAGACGATGAGGAAGCTGTTGCTCGCCTCGAGGAGATAAAAAAATCTGTTGAGGCAAAGATGGCTTTACGTCAAAGCAATTTGAATCCTGAAAGGCCTGACTCAGGATTCTTAAGGACACTGGATTCCAGCATTAAGCGTAACACTGCGGTTATTAAGAAGCTGAAGCAGATCAATGAGGAGCAGCGTGAATCTCTGATGGATGAGTTGAGAAGTGTCAACTTAAGCAAATTTGTCAGTGAAGCGGTGACTGCAATATGTGATGCCAAACTCAGAAGTTCTGATATACAAGCTGCAGTTCAGATCTGTTCTTTGCTTCATCAAAGGTACAAGGACTTTGCTCCAAGCCTGATTCAAGGGCTTCTCAAGGTTTTCTCTCCTGGAAAACCTGGTGATGAATCAGATGCTGATAAAAACTTGAAGGCAATGAAGAAGCGCAGCACCCTGAAACTTCTATTGGAACTTTTTTTTGTTGGCGTTATTGAAGATGGTGGCATTTTTATAAATATCATAAAAGATCTTACCAATGGGGAACAGCTGAAAGATCGGGAAGCTGCACAAACAAGTTTGACCCTTCTTTCCAGTTTTGCTCGTCAGGGGAGAATTTTTCTTGGACTCTCAGTTAGTGGGCCGGAAATTCATGAAGAGTTTTTTAAAGGCCTTAACATCACAGCAGATCAGAAGAAAGTTTTACGGAAAGCATGCTATTCCTTTTATGATGCTGCAGCTGAACTGCTTCAGTCTGAGCATTCTTCACTTAGATTAATGGAGCATGAAAATTCGAAGATTTTGAATGCAAAAGGAGAGCTAAGTGATGAAAATATTGCTTCATATGAAAAGCTTCGTAAATCCTTTGACCATTTGTACCGAAATGTTTCATCATTAGCAGAAGCACTTGATATGCAGCCTCCTGTAATGCCAGAGGATGGACATACGACTAGGGTTACCAGTGGTGAGGAGGGTATTTCTTCTGCTTCTGGTAAAGATTCTTCTGTTGTTGAACCAATATGGGATGATGAAGATACAAGGACTTTCTATGAATGTTTACCTGATCTTAGAGCGTTTGTTCCTGCTGTGCTTTTGGGAGAAACAGAGCAAAAAAGTAGTGAGCAATCTTCAAAGAGTCAAGACCAACCAAATGAAATATCACCTGAATCCGACAAAGGTCAACAGACCACCCATGAAAGTGGAGAGATCTCTACAGAGTCTAATGCTTTGCCAGAGGCAGAAAGCACAGAAAGAGTGAAGGATAAGGAAGAAAAAGACAAGTCTAAAGAACTGGACAGAGAGAAGGAAAAGGAAAAGGAAAAGGAAAAAGACAAAGATAATGATAAAAAGGGAGAAAATGAAAAAGACAAACTCAGAAGTCTTGAAGGGACAAATTTGGATGCTCTACTGCAGAGGCTTCCGGGTTGTGTGAGCCGGGACCTTATAGATCAATTAACTGTCGAGTTCTGTTATCTGAATTCAAAATCAAATCGGAAAAAGCTTGTGAGGGCTTTGTTCAATGTACCAAGGACATCTCTAGAACTGCTAGCATATTATTCACGCATGGTTGCCACACTCTCAACTTGTATGAAGGATGTCTCCTCCATTCTGTTACAGATGTTGGAGGAGGAATTCAATTTCTTAATAAATAAAAAGGATCAGATGAATATTGAGACAAAGATAAGGAATATCAGGTTCATTGGAGAACTTTGCAAGTTCAAAATTGCCTCTCCTGGCCTAGTCTTCAGTTGTTTGAAGGCCTGTTTAGATGATTTCACACATCACAACATTGATGTAGCTTGCAATCTTCTTGAAACATGTGGCCGTTTTCTGTATCGGTCTCCAGAAACTAGTATAAGAATGGCTAACATGTTGGAGATATTGATGCGCTTGAAAAATGTAAAAAATTTGGATCCGAGACATAGCACTTTAGTGGAGAATGCATACTACCTTTGCAAACCACCAGAAAGATCTGCACGAGTAGCTAAAGTTCGTCCTCCATTGCATCAGTATATCAGAAAATTACTTTTCTCTGATCTTGACAAGTCTACCATTGAGCATGTGCTGAGGCAACTGCGCAAATTACCGTGGAATGAATGTGAGCCATATCTTTTGAAATGCTTCATGAAGGTCTACAAAGGAAAATATGGTCAGATCCACCTGATTTCATCTCTTGCTCTTGGATTAAGTCGGTATCATGATGAGTTTGCTGTAGCTATTGTTGATGAGGTTCTTGAGGAGATTAGAGTTGGGTTAGAGTTAAATGACTATGGGATGCAGCAAAGACGCATTGCTTACATGCGATTCTTAGGAGAGCTTTACAACTATGAGCATGTAGACTCTTCTGTTATTTTTGAGACCCTATATCTCATTCTCATCTATGGTCATGGGACATCAGAGCAAGACGTACTTGATCCACCTGAAGATTGTTTTCGCATAAGGTTGATAATTACTCTGCTTGAAACTTGTGGGCATTACTTTGGTCGTGGCTCTTCTAAGAGGAAACTTGATCGGTTCCTAATACACTACCAGAGGTATATTTTAAGCAAAGGGGCTGTGCCTCTGGACATCGAATTTGACTTACAGGATCTGTTTGCGGATTTACGACCCAATATGGTTCGTTACACTTCTATTGAGGAAGTGAATGCAGCTCTAGTAGAACTTGAGGAACATGATAGAATAGTTTCTTCTGATAGGGCCAGTAGTGAAAAACATTCTGACAATGAGAAGCCTTCGAGTAGGACCATTTCCACTACTACTGTGGTTGGCAATGGACAGAGCATTGATAATGGTATGGATGAAAATGGGGTGCAAGATGATGTTAATGACAGTGAGACTGATTCAGGGAGTGACACAATTGATGTAGAGGGTCATAATGATGAAGAGTTGGATGAGGACAATCACGATGATGGCTGTGAAACTGAGGATGATGAAGATGACGATGACGATGGGCCTGGACCTGCTTCCGATGAGGAGGATGAAGTGCATGTGAGACAAAAAGTGACGGAGGTGGACCCTCTGGAAGAAGCTGATTTCGATCAGGAGCTCAAGGCTGTAGTGCAGGAGAGTATGGAACAGAGAAGACAGGAGCTACGGGGTCGTCCTACGTTGAACATGATGATTCCAATGAATGTATTTGAGGGATCTACCAAGGATCACCACGGGAGGGGAGTTGGTGGGGAAAGTGGTGATGAGGCACTGGATGAGGATACAGGTGGAAACAAAGAGGTTCAGGTTAGAGTTCTTGTGAAGCGCGGAAACAAGCAGCAAACAAAGCAGATGTTCATCCCACGGAATTCCTCACTGGTGCAGAGTACAAAACAGAAAGAAGCAGCCGAGCTTCAAGAGAAAGAAGACATCAAGAGGCTTGTTTTGGAGTACAATGACAGAGAAGAGGAGGAGCTTAATGGATTAGGGACCCAGCCGGCAAACTGGATGCCGAGTGTAGGTAACAAAACCAGTGGCCGTGGCAGCACTTTGGATGGAAACAGTGGCAGGGGTAGTGGATCAAGACATCGGCATCATAATTATTCTGGCAGTGGAATATATTACAGCAGAAGAAAGTAA 3588 0.4195 MDHHEDESNSKQDDEEAVARLEEIKKSVEAKMALRQSNLNPERPDSGFLRTLDSSIKRNTAVIKKLKQINEEQRESLMDELRSVNLSKFVSEAVTAICDAKLRSSDIQAAVQICSLLHQRYKDFAPSLIQGLLKVFSPGKPGDESDADKNLKAMKKRSTLKLLLELFFVGVIEDGGIFINIIKDLTNGEQLKDREAAQTSLTLLSSFARQGRIFLGLSVSGPEIHEEFFKGLNITADQKKVLRKACYSFYDAAAELLQSEHSSLRLMEHENSKILNAKGELSDENIASYEKLRKSFDHLYRNVSSLAEALDMQPPVMPEDGHTTRVTSGEEGISSASGKDSSVVEPIWDDEDTRTFYECLPDLRAFVPAVLLGETEQKSSEQSSKSQDQPNEISPESDKGQQTTHESGEISTESNALPEAESTERVKDKEEKDKSKELDREKEKEKEKEKDKDNDKKGENEKDKLRSLEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRALFNVPRTSLELLAYYSRMVATLSTCMKDVSSILLQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIASPGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVAKVRPPLHQYIRKLLFSDLDKSTIEHVLRQLRKLPWNECEPYLLKCFMKVYKGKYGQIHLISSLALGLSRYHDEFAVAIVDEVLEEIRVGLELNDYGMQQRRIAYMRFLGELYNYEHVDSSVIFETLYLILIYGHGTSEQDVLDPPEDCFRIRLIITLLETCGHYFGRGSSKRKLDRFLIHYQRYILSKGAVPLDIEFDLQDLFADLRPNMVRYTSIEEVNAALVELEEHDRIVSSDRASSEKHSDNEKPSSRTISTTTVVGNGQSIDNGMDENGVQDDVNDSETDSGSDTIDVEGHNDEELDEDNHDDGCETEDDEDDDDDGPGPASDEEDEVHVRQKVTEVDPLEEADFDQELKAVVQESMEQRRQELRGRPTLNMMIPMNVFEGSTKDHHGRGVGGESGDEALDEDTGGNKEVQVRVLVKRGNKQQTKQMFIPRNSSLVQSTKQKEAAELQEKEDIKRLVLEYNDREEEELNGLGTQPANWMPSVGNKTSGRGSTLDGNSGRGSGSRHRHHNYSGSGIYYSRRK* 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2234 1195 MobiDBLite consensus disorder prediction 902 1084 - -
Pvu9g2234 1195 Gene3D - 432 674 - -
Pvu9g2234 1195 Gene3D - 675 902 - -
Pvu9g2234 1195 Coils Coil 427 455 - -
Pvu9g2234 1195 MobiDBLite consensus disorder prediction 420 465 - -
Pvu9g2234 1195 MobiDBLite consensus disorder prediction 964 996 - -
Pvu9g2234 1195 MobiDBLite consensus disorder prediction 327 341 - -
Pvu9g2234 1195 Pfam Up-frameshift suppressor 2 997 1133 IPR007193 -
Pvu9g2234 1195 Coils Coil 545 565 - -
Pvu9g2234 1195 SUPERFAMILY ARM repeat 471 665 IPR016024 -
Pvu9g2234 1195 MobiDBLite consensus disorder prediction 375 419 - -
Pvu9g2234 1195 SUPERFAMILY ARM repeat 64 183 IPR016024 -
Pvu9g2234 1195 Coils Coil 11 31 - -
Pvu9g2234 1195 MobiDBLite consensus disorder prediction 997 1039 - -
Pvu9g2234 1195 PANTHER - 3 1194 - -
Pvu9g2234 1195 MobiDBLite consensus disorder prediction 375 465 - -
Pvu9g2234 1195 Gene3D - 8 318 - -
Pvu9g2234 1195 MobiDBLite consensus disorder prediction 1056 1082 - -
Pvu9g2234 1195 MobiDBLite consensus disorder prediction 1139 1195 - -
Pvu9g2234 1195 PANTHER NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2 3 1194 IPR039762 GO:0000184
Pvu9g2234 1195 MobiDBLite consensus disorder prediction 310 343 - -
Pvu9g2234 1195 MobiDBLite consensus disorder prediction 943 957 - -
Pvu9g2234 1195 MobiDBLite consensus disorder prediction 1148 1173 - -
Pvu9g2234 1195 SUPERFAMILY ARM repeat 672 897 IPR016024 -
Pvu9g2234 1195 MobiDBLite consensus disorder prediction 919 940 - -
Pvu9g2234 1195 Pfam MIF4G domain 679 873 IPR003890 GO:0003723|GO:0005515
Pvu9g2234 1195 Pfam MIF4G domain 477 661 IPR003890 GO:0003723|GO:0005515
Pvu9g2234 1195 MobiDBLite consensus disorder prediction 902 918 - -
Pvu9g2234 1195 SMART if4_15 677 878 IPR003890 GO:0003723|GO:0005515
Pvu9g2234 1195 SMART if4_15 474 662 IPR003890 GO:0003723|GO:0005515
Pvu9g2234 1195 SMART if4_15 56 278 IPR003890 GO:0003723|GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2234 K14327 - gmx:100786092 2095.47