Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2228 ATGGAAGGTGGTGTGCCTGAGGCTGATATCTCAGCTTTCAGAGAATGTTTATCTCTTTCATGGAAAAACCCTTATGTTCTTCGCCTTGCTTTCTCTGCTGGAATTGGTGGTCTTCTCTTTGGCTATGACACTGAAGCCATAGTGAGTACTACAATTGCTAGAGCAATCATAGGGGCTTCAGTTGGAGGATGGATCAACGATCGATTTGGAAGAAAGAAAGGAATTGTTGTAGCAGATGCCCTCTTTTTTATTGGGTCTGTTATTATGGCTGCTGCCAGTAGCCCAGTTGTTCTGATTGTGGGTCGTGTATTTGTTGGCATTGGTGTTGGTATGGCTTCCATGGCATCACCCCTCTACATATCAGAGGCTTCACCAACCAGAGTAAGAGGAGCCCTTGTCAGTCTTAACAGTTTTCTCGTCACTGGAGGACAGTTTCTCTCATACCTCATCAACTTGGCCTTCACCAAGACACCAGGGACGTGGAGGTGGATGTTAGGGGTAGCAGCAATACCAGCTTTGATTCAAGTTCTGTTAATGTTTACACTCCCAGAATCGCCTCGTTGGCTGTACCGCAAGGGTAGGGAAGAGGAGGCACAAGAAATTCTGAAAAAGATTTACCCGGCTGAGGAAGTTGAAGGTGAAATTCAGGCTTTGAAGGAATCAATTGATATGGAAATTAAGGAAACAGAATCATCAGAGAAGGTGGGCATGATCAAACTTTTGAGAACCAAAGCTGTGAGAAGAGCTTTATATGCAGGCACAGGCCTTCTAATCTTTCAGCAGTTTGTGGGGATCAACACTGTGATGTACTACAGCCCCACCATTGTTCAGTTGGCTGGTTTTGCATCTAACAGAACAGCACTTCTTCTGTCACTCATCACATCTGGCCTAAATGCATTTGGTTCAATTCTGAGCATATACTTCATTGACAAGACTGGGAGGAAAAAGCTTGCTCTGATCAGTTTGTTTGGAGTTGTGTTCTCCCTGGCTATGCTAACTGTTGCTTTTCGAGAAAGTGAAATGCATTCTCCAATGGTTAGTTCCATTGAAACCTCTCAGTTCAACAACACATGTCCTGATTACAATGCAGCTGTGAACCCTGGTAAATGGAGTTGCATGACATGCCTAAAGGCTTCACCATCTTGTGGTTTTTGTGCTGCTGATGACAAGCTTTTACCCGGGGCATGTTTGATATCCAATGATGTCACAAAGAAGTTGTGTGGCAGTGATCATAGGGCATGGTACACTAGAGGGTGTCCTAGCAAATATGGTTGGGCTGCTTTAACAGGACTTGCTCTTTACATAATATTCTTCTCACCAGGGATGGGAACTGTTCCTTGGGTTGTGAACTCTGAGATCTATCCCTTGAGGTATAGAGGAGTTTGTGGAGGAATAGCATCCACAGCTGTTTGGATTTCCAATCTCATTGTTTCAGAATCCTTTTTGTCCTTGACAGAAGCTATTGGGACAGCGTGGACATTCATGTTGTTTGGAATTGTATCCATTGTGGCCATTTTCTTTGTCATTGTTTATGTACCTGAGACCAAAGGGGTTCCAATGGAAGAAGTAGAGAAGATGTTAGAACAAAGATCATTGCAATTCAAGTTTTGGCAGAAGAGATATTCTGGTTCTGAGAAACAGTGA 1644 0.4361 MEGGVPEADISAFRECLSLSWKNPYVLRLAFSAGIGGLLFGYDTEAIVSTTIARAIIGASVGGWINDRFGRKKGIVVADALFFIGSVIMAAASSPVVLIVGRVFVGIGVGMASMASPLYISEASPTRVRGALVSLNSFLVTGGQFLSYLINLAFTKTPGTWRWMLGVAAIPALIQVLLMFTLPESPRWLYRKGREEEAQEILKKIYPAEEVEGEIQALKESIDMEIKETESSEKVGMIKLLRTKAVRRALYAGTGLLIFQQFVGINTVMYYSPTIVQLAGFASNRTALLLSLITSGLNAFGSILSIYFIDKTGRKKLALISLFGVVFSLAMLTVAFRESEMHSPMVSSIETSQFNNTCPDYNAAVNPGKWSCMTCLKASPSCGFCAADDKLLPGACLISNDVTKKLCGSDHRAWYTRGCPSKYGWAALTGLALYIIFFSPGMGTVPWVVNSEIYPLRYRGVCGGIASTAVWISNLIVSESFLSLTEAIGTAWTFMLFGIVSIVAIFFVIVYVPETKGVPMEEVEKMLEQRSLQFKFWQKRYSGSEKQ* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2228 547 Coils Coil 208 228 - -
Pvu9g2228 547 ProSitePatterns Sugar transport proteins signature 2. 104 129 IPR005829 GO:0016021|GO:0022857|GO:0055085
Pvu9g2228 547 SUPERFAMILY MFS general substrate transporter 19 525 IPR036259 -
Pvu9g2228 547 Gene3D MFS general substrate transporter like domains 403 535 IPR036259 -
Pvu9g2228 547 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 516 IPR020846 GO:0022857
Pvu9g2228 547 PRINTS Sugar transporter signature 37 47 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu9g2228 547 PRINTS Sugar transporter signature 260 270 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu9g2228 547 PRINTS Sugar transporter signature 428 449 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu9g2228 547 PRINTS Sugar transporter signature 451 463 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu9g2228 547 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 1 44 - -
Pvu9g2228 547 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 45 547 - -
Pvu9g2228 547 TIGRFAM SP: MFS transporter, sugar porter (SP) family 45 341 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu9g2228 547 PANTHER GENERAL SUBSTRATE TRANSPORTER 1 44 - -
Pvu9g2228 547 PANTHER GENERAL SUBSTRATE TRANSPORTER 45 547 - -
Pvu9g2228 547 Pfam Sugar (and other) transporter 423 526 IPR005828 GO:0016021|GO:0022857|GO:0055085
Pvu9g2228 547 Pfam Sugar (and other) transporter 45 336 IPR005828 GO:0016021|GO:0022857|GO:0055085
Pvu9g2228 547 Gene3D MFS general substrate transporter like domains 20 353 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2228 Pvu-Chr9 31923569 31927398 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2228 1 547 Organic Solute Cotransporters AT1G30220 67.535 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2228 K08150 - gmx:100785028 955.666