Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2220 ATGGCGGAAAAACCAGTCCAAGACCATGAAGGCACTTCAGCCTCGTCTTCCACCTCTGTTTCTGTTCCGGCATCTGCATCACCTTCCAATTCTGTTTCTCTTCCAGTATCGGCATCGTCTTCCACTCCGGTATCTTCATTGTCTTCCACCTCGGCTTCTGTTTCCGTAGCTTCATCAGCCTCGGCTTTTGTTACAGCTTTGGTATCAGCATCTGTAAGCACATCACCATCAGCTTTGTCGGCGCTATCGAAATTAGCATCAGCAGCATGGGCAACGGAATCAGCACCCGCAACATCCACAACACGGGCAACAGAATCAACATCCAGATCCTCTTTGGTGGCATGGACACTCACAGACGAGTTACCCATAAAACTAGAAGGAGTAATCAATTTGGTTGCTTGGAAACAGCAAGTTATGCGTGTGTTGATCAAAGAAAATTTGCTAGGGTTGGTTATAAACCCTGTGACCCCTATAAAATATGCAAACCAAGTCAGTGATGTGGTAAGGGAGGAGTATGAAGAATGGGTTATTCATGATGAAAAGGTGCGCACTTGGCTGTTATCATCTTTATCTGAATTCATGTGTTCTTTTGTGACGGGATGGGAACATGCCTGGGAGGTCTGGAGTGCAGTGCACGAAATATGCCGTACTGAGTTGATAAACAAGCTCAAGATAGCCCTAAGGGCAGAGATCAAGAACACAAAGAAAGAGAATCAAAGTGTGACAGAATATGTTAGCAGGGTCACTTCTCTCATCAGTGCATTAGTTGGTTTGGGAGATGAGGTCTCTGAACATGAACATGTTGAGGCCATCTTGGAAGGCTTGCCCGAGGAGTATGAATCTTTGCGAGCAATCATTCGTGCACGCAGTGAACACGCCACGGTTTCTCATCTTGAATCGTTGATGTTAATTCAAGAAACGTTAGTTAACAATCTTAATAATAGACTTCCCCTTCATTCTGTACTTCCCCTCGGAAATCTTCATCTTGATGATGGAGCAGGAAGAGGCCGTGGCAGTGGCAGTGCTCAAGGTGGTGGCAGAGGTCGCCGTCGAGGCGGTGGTCGACGTCGCGATGGTACCTAG 1083 0.4672 MAEKPVQDHEGTSASSSTSVSVPASASPSNSVSLPVSASSSTPVSSLSSTSASVSVASSASAFVTALVSASVSTSPSALSALSKLASAAWATESAPATSTTRATESTSRSSLVAWTLTDELPIKLEGVINLVAWKQQVMRVLIKENLLGLVINPVTPIKYANQVSDVVREEYEEWVIHDEKVRTWLLSSLSEFMCSFVTGWEHAWEVWSAVHEICRTELINKLKIALRAEIKNTKKENQSVTEYVSRVTSLISALVGLGDEVSEHEHVEAILEGLPEEYESLRAIIRARSEHATVSHLESLMLIQETLVNNLNNRLPLHSVLPLGNLHLDDGAGRGRGSGSAQGGGRGRRRGGGRRRDGT* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2220 360 PANTHER - 133 355 - -
Pvu9g2220 360 MobiDBLite consensus disorder prediction 332 360 - -
Pvu9g2220 360 Pfam gag-polypeptide of LTR copia-type 175 305 - -
Pvu9g2220 360 MobiDBLite consensus disorder prediction 9 44 - -
Pvu9g2220 360 MobiDBLite consensus disorder prediction 1 44 - -
Pvu9g2220 360 PANTHER - 133 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2220 Pvu-Chr9 31784247 31785329 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2220 - - pvu:PHAVU_009G215200g 472.626