Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2210 ATGGAGAAGAAGAGAAGGAGGAAAAGTGGTGGAAGAAACGAAGAGGACAGATTGAGTGATTTACCAGATGGTGTTCTTCTTTACATAATGGAGTTTTTGCCCACAAGACAAGTTGTTCAGAATAGTGTGTTATCTAAAAGATGGAAGAACCTTTGGAAAAGCCTATCCACTTTATCTTTCAAACCCTTCTATGGAATTCGCAAATACAACAAATCTCTCTCACACATTTTCTCCAATCGAGATCATTCTGTTCCCCTGCACAACCTTCATTTGACAAAGTTGACACTCTCTATAGATTTCAAGTTCAAAGAAATGCCTAATTCTTTCGTTTCCCTTATTTTCAACTGTCAATCTTTAACCTTTCTTGACCTTTTCATCAGTTCCTCTTGCTTTTCCTTGAAACTTCCACCGTGTCTTTTGCTACCATCTTTGAAAACCTTGAATCTCTCAAATATCACTTTCACAGCAAGAGATAATGACTGTGTTGAACCCTTCTCAACAAGCACTTCATTGACCACTTTGGTCCTTCGACATTCTCTGCATCACCATTCAGCACAAACTCTTTGCATATCTAACCCTACTATTTCCACTTTGAAGTTGGAAAACATGGTCCACTCCAACACTTTTATACCTAAAATTGTGCTTTCTGTTCCAAATCTCAGTTCATTCACACTTGAGAATAGTCACTCTTCCATGTGCTATGAACTCTCCAGCACTTGCCATCTTCCTTTCCTCAAAGAAGTGAAAATCGACAACCGTGTTCGGGTACATTCTTCCATCATCATAAATTGGTTAGCATTGTTCTGTAACGTAAGAACTTTGACACTATCTTCTCATACCCTCTATATATTTCTAAAGGATTTTTATCTGGGTACCATGGATATTCAACCTCCCTACTTTGGTAGATTGAAAACATTCAAAATCGAAATGGGTTTTAATAGCTATATGATATCTGAAGATGAAGTAAACACGGTTTTGGAATACTTAGTGCAAAATTGTGAAACAACAAATGTTGATGTGATAGAATGCTAA 1032 0.3711 MEKKRRRKSGGRNEEDRLSDLPDGVLLYIMEFLPTRQVVQNSVLSKRWKNLWKSLSTLSFKPFYGIRKYNKSLSHIFSNRDHSVPLHNLHLTKLTLSIDFKFKEMPNSFVSLIFNCQSLTFLDLFISSSCFSLKLPPCLLLPSLKTLNLSNITFTARDNDCVEPFSTSTSLTTLVLRHSLHHHSAQTLCISNPTISTLKLENMVHSNTFIPKIVLSVPNLSSFTLENSHSSMCYELSSTCHLPFLKEVKIDNRVRVHSSIIINWLALFCNVRTLTLSSHTLYIFLKDFYLGTMDIQPPYFGRLKTFKIEMGFNSYMISEDEVNTVLEYLVQNCETTNVDVIEC* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2210 343 Gene3D Ribonuclease Inhibitor 14 293 IPR032675 -
Pvu9g2210 343 ProSiteProfiles F-box domain profile. 15 63 IPR001810 GO:0005515
Pvu9g2210 343 Pfam F-box domain 18 55 IPR001810 GO:0005515
Pvu9g2210 343 PANTHER CYCLIN-LIKE F-BOX 12 340 - -
Pvu9g2210 343 PANTHER F-BOX/RNI/FBD-LIKE DOMAIN PROTEIN 12 340 - -
Pvu9g2210 343 SUPERFAMILY F-box domain 7 63 IPR036047 GO:0005515
Pvu9g2210 343 SUPERFAMILY RNI-like 78 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2210 Pvu-Chr9 31693955 31695158 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2210 4 209 EF-hand Containing Proteins AT5G41840 27.419 2.29e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2210 - - pvu:PHAVU_009G214300g 643.269