Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2208 ATGAGAAAGTTGAGAAGGGAGAAGAAGAGAAGAAGGAAAAATGGTGAAAGAAAAGAAGAAGACATACTGAGTAATTTACCAGAAGGTGTTCTTCTCTACATAATGGAGTTTTTTCCCACAAGAGAAGCTGTTCAGAGTACCGTGTTATCCAAAAGATGGAAAAATCTTTGGAAAAGTCTCACCAGTTTATCTTTCAAACTCTTCAATGGAATTCGCAAATACAACAAATTTGTATCTGGCGTTCTCTCTAATCGAGATCATTCTGTTTCCTTGCATAACCTTCATTTGACAGTCTTCAATTCCAGTGCACCAAAACTCCTCAACAATGCCATGAAATATGCTGCATTGCACCATCTCCAGAAGTTGACACTAGCTATAGACTTCAAGTTCAAAGAAATACCTAATACTTTTTTCCCCCTCATTTTCAACTGTCAATCTTTAACCTTTCTTGACCTTTTCATCACTTCCTCTCGCTCTTCCCTGAAACTTCCACCATCTCTTTTGCTACCATCTCTGGAAACCTTGCATCTCTTCAATGTCACTTTCACAGCAATAGAGAATACCTGTGCTGAACCCTTCTCAACATGCACTTCATTGACCACTTTGGTCCTTCGCCATTCTATGCATCACCAGTCAACACAAACTCTTTGCATATCTAACCCTAGCATTTCCACTTTGAAATTGGAAAACATGGGGCACTCGCACACTTTTGTACCTAAAATTGTGTTTTCTGTTCCAAATCTCAGTTCATTCACACTTGAGAATAGTCACTCTTCCATGTGTTATGAACTCTCCAGCACTTGCAATTTTCCTTTCCTCAAAGAAGTGAAAATCGACAATCGTGTTCGGGTACATTCTTCCATCATCATAAATTGGTTAGCATTGTTCTCTAATGTAAGAACGTTGACATTGTCTTCTCATACCCTCTATATATTTCTAAAGGATTTTTATCTGGGTATAATGGATATTCAACCTCCCTACTTTAGTAGATTGGAATCATTCAAAATCGAAATGGGTTTTAATAGCAATATGATATCCGAAGATGAAGTAAACATGGTTTTGGAATACTTAGTGCAGAATTGTGGAACAACAAATATTGATGTGATAGAGTGCTAA 1116 0.3746 MRKLRREKKRRRKNGERKEEDILSNLPEGVLLYIMEFFPTREAVQSTVLSKRWKNLWKSLTSLSFKLFNGIRKYNKFVSGVLSNRDHSVSLHNLHLTVFNSSAPKLLNNAMKYAALHHLQKLTLAIDFKFKEIPNTFFPLIFNCQSLTFLDLFITSSRSSLKLPPSLLLPSLETLHLFNVTFTAIENTCAEPFSTCTSLTTLVLRHSMHHQSTQTLCISNPSISTLKLENMGHSHTFVPKIVFSVPNLSSFTLENSHSSMCYELSSTCNFPFLKEVKIDNRVRVHSSIIINWLALFSNVRTLTLSSHTLYIFLKDFYLGIMDIQPPYFSRLESFKIEMGFNSNMISEDEVNMVLEYLVQNCGTTNIDVIEC* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2208 371 PANTHER F-BOX/RNI/FBD-LIKE DOMAIN PROTEIN 13 368 - -
Pvu9g2208 371 PANTHER CYCLIN-LIKE F-BOX 13 368 - -
Pvu9g2208 371 Gene3D Ribonuclease Inhibitor 116 368 IPR032675 -
Pvu9g2208 371 SUPERFAMILY L domain-like 84 309 - -
Pvu9g2208 371 Coils Coil 1 21 - -
Pvu9g2208 371 Gene3D - 7 63 - -
Pvu9g2208 371 ProSiteProfiles F-box domain profile. 20 68 IPR001810 GO:0005515
Pvu9g2208 371 Pfam F-box domain 23 60 IPR001810 GO:0005515
Pvu9g2208 371 SUPERFAMILY F-box domain 20 70 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2208 Pvu-Chr9 31674269 31675487 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2208 9 237 EF-hand Containing Proteins AT5G41840 28.063 2.93e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2208 - - pvu:PHAVU_009G214300g 532.717