Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2206 GGTGTTCTTCTTCATATAATGGAGTTTTTGCCAACAAGACAAGTTGTTAAAAGTAGTGTGTTATCTAAAAGATGGAAGAACCTTTGGAAAAGTCTCACCACTTTATCTTTGATACCCTTCAATGGAATTCGCAAATACAACAAATCTCTCTCTCACGTTTTCTCTAATCGAGATCATTATGTTCCCCTACACAACCTTCATTTGAGAGCCTACCATTCCACTGTAGCAAAACTCCTCAACGATGCCATCAAATATGCTGCATTGCACCATCTCCAGAAGTTGACACTCTCTATAATAAGAGAAATACCTAATTCTTTTGTTTCCCTCATTTTCAGTTGTCAATCTTTAACCTTTCTTGACATTTTCATTTGTCCCTCTCACTCTTCCATGAAACTTCCACCATCTATTTTGCTACCATCTTTGAAAACCTTGCATCTCTCCAATGTCACTTTCACAACAACAGATAATGACTGTGTTGAACCCTTCTCAACATGTACTTCGTTGACCACTTTGGTCCTTCAACATTCTATGCATTACCAATCAGCACAAACTCTTTGCATATCCAGCCCTAGCATGTGCACTTTGAAACTAGAAAACATGGTCCACTCCCACACTTTTATACCTAAAATTGTGCTTTCTGTTCCAAATCTCAGCTCATTCACATTTAAGCATACTCACACTTCCAAGCATTATGAATTCTCCTGTACTTGTCATCTTCCTTTCCTCAAAGAAGTGAAAATTGACAACTGTGTGAATATACATTCTTCCATCATCATAAATTTGTTAGGATTGTTCTCTAACGTAAGAATGTTGACATTGTCTTCTCATACCCTCTATATATTGCTAAAGTTTTATATTGTAATAGTCCGATCTATGATGTTTTGTTACATTGGTTTCGACACATGA 906 0.3664 GVLLHIMEFLPTRQVVKSSVLSKRWKNLWKSLTTLSLIPFNGIRKYNKSLSHVFSNRDHYVPLHNLHLRAYHSTVAKLLNDAIKYAALHHLQKLTLSIIREIPNSFVSLIFSCQSLTFLDIFICPSHSSMKLPPSILLPSLKTLHLSNVTFTTTDNDCVEPFSTCTSLTTLVLQHSMHYQSAQTLCISSPSMCTLKLENMVHSHTFIPKIVLSVPNLSSFTFKHTHTSKHYEFSCTCHLPFLKEVKIDNCVNIHSSIIINLLGLFSNVRMLTLSSHTLYILLKFYIVIVRSMMFCYIGFDT* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2206 301 SUPERFAMILY F-box domain 2 42 IPR036047 GO:0005515
Pvu9g2206 301 Pfam F-box domain 2 31 IPR001810 GO:0005515
Pvu9g2206 301 PANTHER CYCLIN-LIKE F-BOX 2 280 - -
Pvu9g2206 301 Gene3D Ribonuclease Inhibitor 14 275 IPR032675 -
Pvu9g2206 301 PANTHER F-BOX/RNI/FBD-LIKE DOMAIN PROTEIN 2 280 - -
Pvu9g2206 301 SUPERFAMILY RNI-like 63 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2206 Pvu-Chr9 31663005 31664242 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2206 1 206 EF-hand Containing Proteins AT5G41840 29.258 9.53e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2206 - - pvu:PHAVU_009G213900g 597.43