Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2204 ATGCCATCCCTAAAAATGAAGAGCAAAGTAAGCGTGAGCTGTTTAACAGAAACAAAAGATCTTCATGTGTGTCCGAAATCAAAAATTATCTCCAAAAGCCCATGTTCTAAAATCATGATCTCTACACAAAAGGCTGAAATAGACGCTACTTATCTAGATGTTTCCTCAAGGACACAGCCCAAAGATGATGCTTGCGATCAATCTATTGACAGCAACGAATTTGTGGATAAAGAAAAGTCTGAATCCGAGCACCAATTTTCTGTTTGTTCTTCTGTCCTGGGAAAAATGGAACTAACCAACCCCTGTACAGCAAGCTTACAAACAATGTTTTCTCCTGCTTTTGAGCCCATTGAAGTCCATTCACAACATTATACTGAAAAGGATGCAGGGAGCATTGGTGATACAAACATAGTAGGACTGGGAGCTGATGAGGGAAGAAGCATTTGTGGTTATGAAACATGTGATGTATCTGACTTTTACATTTCTGACATGATCATTACAAGCTTACCCTTTGGTGGAAATTCCTTTGATGATGATATCAGTGAAAGCAACTGCCTATCTGATTATGGATCTGCTGAGCCTTCCATGTTTACTGCATCTGAACAGTACATGATCCTGCCTGCTCTTGAAGATGATATTAAAGTTGGTTGTACTTCTGATATCGTATCATTTGAAGAAACTGTGATGGTTCGAGAAAGTGCCAGTTTGTATTCGGCAATGGGTCAGATAAGATCCTGCAACCAGGAGTCAGATGTTAAAAGTGACTTGGATAAATCAGAGTGCTTTGATCCACAGTCATTTATCAAGAATCTACCAGAACTATCAGAAATAGAAGTGAATGGGCAGCCAACCCTAATTCCTAAGGAATCTCCAAGAAGAAAGTCAATAACTCTAGTGCTTGATTTAGATGAAACACTTGTTCATTCTACACTGGAACACTGCGATGATGCGGATTTCACTTTTACTGTTTTCTTCAATATGAAAGAATACACGGTATATGTAAAACAGAGGCCTTATCTCCACGCATTCTTGGAGAGAGTATCAGAGATGTTTGAAGTAGTTATTTTTACTGCCAGCCAGAGCATATATGCAAAGCAACTACTTGATATATTGGATCCTGAAGGAAGATTTATCTCTCGTCGCATGTATCGAGAGTCATGCCTTTTCTCAGATGGAAATTACACAAAAGATCTTACTATATTAGGTGTTGATCTTGCAAAAGTTGCTATAATTGATAATTCACCTCAGGTTTTCCGGTTGCAAGTAAATAATGGTATTCCTATAAAGAGTTGGTTTGATGATCCATTAGATTGCGCACTGATGTCACTACTTCCCTTTCTTGAGACTTTGGCTGATGCTGATGATGTCCGTCCTCTCATTGCAAAGAGATATGAATTGGTTCCCCTTTCTTCTCAGTTGACAAATGTGGAGTTCTGTGTTTCTCTCAAAAGGTAG 1455 0.3883 MPSLKMKSKVSVSCLTETKDLHVCPKSKIISKSPCSKIMISTQKAEIDATYLDVSSRTQPKDDACDQSIDSNEFVDKEKSESEHQFSVCSSVLGKMELTNPCTASLQTMFSPAFEPIEVHSQHYTEKDAGSIGDTNIVGLGADEGRSICGYETCDVSDFYISDMIITSLPFGGNSFDDDISESNCLSDYGSAEPSMFTASEQYMILPALEDDIKVGCTSDIVSFEETVMVRESASLYSAMGQIRSCNQESDVKSDLDKSECFDPQSFIKNLPELSEIEVNGQPTLIPKESPRRKSITLVLDLDETLVHSTLEHCDDADFTFTVFFNMKEYTVYVKQRPYLHAFLERVSEMFEVVIFTASQSIYAKQLLDILDPEGRFISRRMYRESCLFSDGNYTKDLTILGVDLAKVAIIDNSPQVFRLQVNNGIPIKSWFDDPLDCALMSLLPFLETLADADDVRPLIAKRYELVPLSSQLTNVEFCVSLKR* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2204 484 TIGRFAM HIF-SF_euk: dullard-like phosphatase domain 297 459 IPR011948 GO:0016791
Pvu9g2204 484 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 1 466 - -
Pvu9g2204 484 Pfam NLI interacting factor-like phosphatase 297 457 IPR004274 -
Pvu9g2204 484 CDD HAD_FCP1-like 296 428 - -
Pvu9g2204 484 Gene3D - 281 464 IPR023214 -
Pvu9g2204 484 ProSiteProfiles FCP1 homology domain profile. 291 450 IPR004274 -
Pvu9g2204 484 PANTHER SCP1-LIKE SMALL PHOSPHATASE 4-RELATED 1 466 - -
Pvu9g2204 484 SUPERFAMILY HAD-like 285 461 IPR036412 -
Pvu9g2204 484 SMART forpap2 294 438 IPR004274 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2204 Pvu-Chr9 31642018 31648344 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2204 K17616 - gmx:100799803 857.055