LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu9g2199	ATGGACGAGTCTTGGAGAATGCGAATGGGACTCACCACGGGGCTTCCTCGCCGCCGATCCATGGAGGACCGTTCCGCCTCCCGCACTCGCCGCTCCATCTTCTTCGCCGCCACCGCCGAGGCGGAAACCCTCGACCCTGACGACTTCGCCGACGTCTTCGGAGGCCCGCCGAGGAGCCTCCTCGCGCACAAGTTCTCCAGGTCCAATTCCTTCTACGAGGAGGTTTTCCGACCGCCGGAATTCTCTTCTCCGGCGAATGCGAAGGGCGGCCGGAGCTTGCCGGTGTTCCGGATTCCAGCGAAGAACGAGGCGTTTTACAGCGACATATTAGGGTCGGACGATGACCGGCGGTCGCGGGAGCGGTCGGGGCCGCAGTCGAAGGCGAAATCGAAGTCGAATTCGTCGTCGGCGCTGAGTTCCGAGGAGCTGAGCCCTCTCCGGCCGGCTATCGGTGATGACGTGGCATTATCTGCCTTTGCTTCTAAGCTCAGGCCAATCAATGTCCCATGCAGATGGAACTCAACCACTATGATGCCTGGGGAACACCCAATTAAACAAGGGGGGCCACTTTTTCCCTTCAATAATCAGTCATTTGAAATTCATTGTCAGGATAATGAGTACAAGGAGAGCTTCAAGAGTCCTCATTTGGGATTCTCACGAAGAGTCTCCTCACCAGAGACAATTAGTCTCGAATCCAATTCATACCAAAGCATGAAGGTATCCGCTGATGACTGGGAACTCAGTTCCCCGTTTTCTGCTGTCTCTGGGCTTTGTCAAGAACCTGAGGCAAAATCTTCAGGTCGTGATTATATCCTTCCAGAACTGGTTATAGAACAGGACGATGATGAAGTTATGAGCTCCTATGTCATAGAGGTAAACTCCAATTTCAGAGAGGAAAGTTGTGGAACAGCAGACATTGATGAAGCAATAGCATGGGCCAAGGAGAGGTTTCAATCACGAAATTCTGATGAAGAATCAAGCTTGAGAAATGAAAACAATGAACAAACCACAGCGGTGGAAGGAAGGTCTGATGCAGATGAATGCCATAGTGATGAAACGGGAAACGTTAAATCTTCGAAGGCAGAAACAGAGAAGTTGGACAGAGATATAAGATTGTGGTCATCTGGCAAGGAAACTGACATTCGGCTACTCCTGTCAACACTAGATGATATATTATGGCCTGAGAGTGGCTGGTATGCTGTTCCTCTTCCGAACCTAATAGAAAGTTCACAAGTGAAGAAGGCCTACCAGAAAGCAAGATTATGCCTCCACCCTGACAAACTGCAGCAAAGAGGAGCAACACCCCTACAAAAGTATATAGCAGAGAAGGCTTTCTCCATTCTTCAGGATGCATGGACTGCATTCATTTCTGAAGACGTTTCCTTCTAA	1389	0.5032	MDESWRMRMGLTTGLPRRRSMEDRSASRTRRSIFFAATAEAETLDPDDFADVFGGPPRSLLAHKFSRSNSFYEEVFRPPEFSSPANAKGGRSLPVFRIPAKNEAFYSDILGSDDDRRSRERSGPQSKAKSKSNSSSALSSEELSPLRPAIGDDVALSAFASKLRPINVPCRWNSTTMMPGEHPIKQGGPLFPFNNQSFEIHCQDNEYKESFKSPHLGFSRRVSSPETISLESNSYQSMKVSADDWELSSPFSAVSGLCQEPEAKSSGRDYILPELVIEQDDDEVMSSYVIEVNSNFREESCGTADIDEAIAWAKERFQSRNSDEESSLRNENNEQTTAVEGRSDADECHSDETGNVKSSKAETEKLDRDIRLWSSGKETDIRLLLSTLDDILWPESGWYAVPLPNLIESSQVKKAYQKARLCLHPDKLQQRGATPLQKYIAEKAFSILQDAWTAFISEDVSF*	463

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu9g2199	462	MobiDBLite	consensus disorder prediction	109	144	-	-
	Pvu9g2199	462	Gene3D	DnaJ domain	357	460	IPR036869	-
	Pvu9g2199	462	CDD	DnaJ	398	452	IPR001623	-
	Pvu9g2199	462	SUPERFAMILY	Chaperone J-domain	335	458	IPR036869	-
	Pvu9g2199	462	MobiDBLite	consensus disorder prediction	1	26	-	-
	Pvu9g2199	462	PANTHER	AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED	1	457	-	-
	Pvu9g2199	462	MobiDBLite	consensus disorder prediction	109	126	-	-
	Pvu9g2199	462	MobiDBLite	consensus disorder prediction	340	361	-	-
	Pvu9g2199	462	MobiDBLite	consensus disorder prediction	321	361	-	-
	Pvu9g2199	462	MobiDBLite	consensus disorder prediction	127	142	-	-
	Pvu9g2199	462	PANTHER	CHAPERONE DNAJ-DOMAIN PROTEIN	1	457	-	-
	Pvu9g2199	462	Coils	Coil	314	334	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu9g2199	Pvu-Chr9	31542437	31546092	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu9g2199	-		-	gmx:100801416	791.956