Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2187 ATGGCGAAACTGAAGATAGGAGGAACATGGGCAGGGGTGGTGGAAGAGGTGGACCTCCACGCCTGGACCCTCGCCATGCTCCGCGACCGCGTCGCCGAGCGATCCAACTCTCCCTCCCACTGCATCAACCTTATCTGCGCCGGCAAGATTCTCCGAGACGACGCCGTTCCGCCCCAAACCCTTTCCCAACTCGGCATAAAAAACAACGCTAAGATCCTCGCCACGCGCGCCTCCTCTCCGCAGCAGGGACTCTCCCTCGTCGCGCAGGAAGAGCGCTGCTCCAGACTCGCGCGTATCAGGGCTGCTGCGACTGCGATGGCGGAACGCCACGCGGATGGTGCGTTGCCGGTTGAGGACTTCAATATCGAAGTTGAGGATCAGAGTGGACAGAAAGTGCGGTTAGGCTCCGAGACTGATCAAAGGGCAGTGATGATGGGACTGATGCTTCACGCGAAGGGGAAGAAACTCATCAAACAGGGGAATTACAAAGATGCGCTGGAAGTGCTTAGCATGGGAGAGGAGTCATTCTCTCTTTGTGATTCAAAGGTCATTGAGCTTATTGACAATGTTCCTATACTGCAAATAGACATGGTATGGTGCTATTTTATGATACGAGACATCAGATGGCTCGCAGACGCAGGAAAGCGTCTTGAAATAGCTAGGATAGGAATTGAACGGGCTCATGGAAAGGATTCTCTTCGCCTGAGGCTCTTACAAGGTGGTCGATTTCCAGAACTTGCATTGCATTTGAGACTAGAGCTGCTTGAAGGGGTGGTGGCATATCATACTGGGCAGTTAGAGAAATCCCGAAAAGCATTAGCCTCTGCAAGAGCTAAGTTCGTCCAGCTGCAAGTGTCAGATGAAGCCTTATCATTTGTTATGAGCATGGGCTTTGTTGAACGTGATGCAAAGCGAGCATTGCGGATGAACAATCAAGATGTTGGGGGTGCCATTGATTTCCTTGCTGAGGAGAAAGCAAAGAAATTGCAGAAGCGGGAGGAGGATATTCGGAGAAGAAATGAAATTAAGGAACAAAAGCGGTATGGGATGACACCCTTAAAGAAAGCTGTGGATCTAGAGAGATTGAAGGAATTGGTCTCTATTGGGTTTGACAAGGAGCTTGCTGCTGAAGCCCTTAGACAAAATGAAAATGATACTCAGAAAGCATTGGATGATTTGACCAATCCTGAAACTAATTCTGCTTTACAGGTTGCGATCGAGTCAAGGAAAAGGAAGAGACAAAAACAAGTAAAAGATTCTGAAATTGAAAAAGTTGTGCAAATGGGTTTTGAAAGAGCAAGAGTTGTTGCTGCTTTTGAGGCCGGAGGTAGTGTGGAACAAGTTTTGCAAAGACTGACGGCACAACCTGAGATCGAACCCACATCAGCTACCATAAATACACATTCAACAGCCGCTCCCCATGGTGGTGCTAGTTCATCTACTCTATTACCTAACAACGTTAATTCTGATGATCTATACGCGATGAATGAGGTTGAAGACAGTAAAACACAACGAGATAAAGAAATGGAAGATGAGCTCTCTGCAGATATTGCAAAAGCAGATGCCTTGGCTGATTATGACATTGAAGTTAATGTAGAAGGAGAAGCCATAACTGAGTACCTGGCCCTGGTTGAGTCAGCAGGGAGTTGCGGCGAAACTGCACCTTCCCAGTAA 1674 0.4809 MAKLKIGGTWAGVVEEVDLHAWTLAMLRDRVAERSNSPSHCINLICAGKILRDDAVPPQTLSQLGIKNNAKILATRASSPQQGLSLVAQEERCSRLARIRAAATAMAERHADGALPVEDFNIEVEDQSGQKVRLGSETDQRAVMMGLMLHAKGKKLIKQGNYKDALEVLSMGEESFSLCDSKVIELIDNVPILQIDMVWCYFMIRDIRWLADAGKRLEIARIGIERAHGKDSLRLRLLQGGRFPELALHLRLELLEGVVAYHTGQLEKSRKALASARAKFVQLQVSDEALSFVMSMGFVERDAKRALRMNNQDVGGAIDFLAEEKAKKLQKREEDIRRRNEIKEQKRYGMTPLKKAVDLERLKELVSIGFDKELAAEALRQNENDTQKALDDLTNPETNSALQVAIESRKRKRQKQVKDSEIEKVVQMGFERARVVAAFEAGGSVEQVLQRLTAQPEIEPTSATINTHSTAAPHGGASSSTLLPNNVNSDDLYAMNEVEDSKTQRDKEMEDELSADIAKADALADYDIEVNVEGEAITEYLALVESAGSCGETAPSQ* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2187 557 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 356 396 IPR015940 -
Pvu9g2187 557 SUPERFAMILY UBA-like 354 396 IPR009060 GO:0005515
Pvu9g2187 557 Gene3D - 14 83 - -
Pvu9g2187 557 SMART uba_6 418 454 IPR015940 -
Pvu9g2187 557 SMART uba_6 358 395 IPR015940 -
Pvu9g2187 557 SMART uba_6 286 323 IPR015940 -
Pvu9g2187 557 ProSiteProfiles Ubiquitin domain profile. 23 72 IPR000626 GO:0005515
Pvu9g2187 557 PANTHER NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN 21 547 IPR039749 -
Pvu9g2187 557 SUPERFAMILY Ubiquitin-like 22 75 IPR029071 -
Pvu9g2187 557 CDD UBA 362 391 - -
Pvu9g2187 557 Coils Coil 326 346 - -
Pvu9g2187 557 MobiDBLite consensus disorder prediction 466 488 - -
Pvu9g2187 557 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 284 324 IPR015940 -
Pvu9g2187 557 SUPERFAMILY UBA-like 278 324 IPR009060 GO:0005515
Pvu9g2187 557 Gene3D - 359 396 - -
Pvu9g2187 557 Gene3D - 286 325 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2187 - - gmx:100792972 897.116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2187 9 31418298 31423108 Pvu9g2187 9 31418298 31423108 ECH