Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2184 ATGGCCTACTCTCTCCCGCCACCACCGCCGCCACCGCCCTCTCTCCCTCTCCCCAACCACTTCACGCGGCGCTCCCTCCTTCTCCTCTCCACCACAACCACCACCAGCACCACCCTCTCCCTCCCCTCCACGCCCCCTCCCACCCCAACCGTCACCGATCGCTTCTTCATGGACTTCAGCCTCTGCCCCAACAACTTCCTCCCCGACCGCGCCGACACCCTCTCCCCCATCTGCTCCGATTCCAAGCTATTGGGCCGCGTTGTATTGGGTCTCTTCGGTAACCTCGTTCCCCGCACCGTCTCAAATTTTAAGTCAGTGTGTCTCGGCTCAAACGCCACATCATCTTCTTACAAGAACACACTCGTCCACAAGGTCTTTCCCGGCCAGTACCTCCTCGCCGGCCGCCAGGGCCGCCCCGACAAGGGCGAGGTCCGCCCGCCGCGCGACCTGCCCCGCAACACCGAGACCGTCGACGCCAAGGCCTTCGCGCTCATCCATTCCCGTCCCGGCGTCGTTTCGCTCTCGCTCTCCGAAAACGACGATGACGACGATGTTAAACTCGATCCTGAATACCGGAATGTTGAGTTCTTGATCACCACTGGACCCGGGCCTTGCCCCCAGCTCGATAACAAGAACATTGTCTTTGGAACAGTTCTCGAAGGATTGGATGTCATCACAGCCATAGCTTCCATTCCTACCTACCAACCATCTGAGAGAATTCGCCAGTTTAATGACTTGGCTGAATTTTTTGGAGATGGAAGGGCTCAGAATGCACGTAACATATGGAACAGGCCTCTTACGACTGTTTATATTAGTGACTGTGGAGAACTGAAAGTGACAAAGCCTTCCCTCACGCCTTCTTTGCCATAA 870 0.5713 MAYSLPPPPPPPPSLPLPNHFTRRSLLLLSTTTTTSTTLSLPSTPPPTPTVTDRFFMDFSLCPNNFLPDRADTLSPICSDSKLLGRVVLGLFGNLVPRTVSNFKSVCLGSNATSSSYKNTLVHKVFPGQYLLAGRQGRPDKGEVRPPRDLPRNTETVDAKAFALIHSRPGVVSLSLSENDDDDDVKLDPEYRNVEFLITTGPGPCPQLDNKNIVFGTVLEGLDVITAIASIPTYQPSERIRQFNDLAEFFGDGRAQNARNIWNRPLTTVYISDCGELKVTKPSLTPSLP* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2184 289 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP28, CHLOROPLASTIC 19 289 IPR044178 -
Pvu9g2184 289 CDD cyclophilin 85 241 - -
Pvu9g2184 289 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 74 276 IPR002130 GO:0000413|GO:0003755
Pvu9g2184 289 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 84 238 IPR002130 GO:0000413|GO:0003755
Pvu9g2184 289 SUPERFAMILY Cyclophilin-like 76 278 IPR029000 -
Pvu9g2184 289 Gene3D - 48 283 IPR029000 -
Pvu9g2184 289 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 91 106 IPR002130 GO:0000413|GO:0003755
Pvu9g2184 289 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Pvu9g2184 289 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 210 225 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2184 Pvu-Chr9 31350337 31352268 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2184 K03768 - gmx:100816868 449.514